PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011992.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 522aa MW: 55433.7 Da PI: 6.436

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011992.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.4	3.7e-39	159	219	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG +rnvPvG+grrknk+ss PCP011992.1 159 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGIMRNVPVGAGRRKNKNSS 219 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MSSEGEGGGH TIKLFGKTIP LAMAPLNRES SSAIDEPCGS VEHDVTATAC GGGGGGAEDC 60 YETRQKLSSS SSAATNSGGD YLEREGDAQQ EETISGKELA ADKQDADTSD LITEDLKAPT 120 TSSGISENPK TPSADRETSC KNGDQSETSS SQDKTLKKPD KILPCPRCNS MDTKFCYYNN 180 YNVNQPRHFC KNCQRYWTAG GIMRNVPVGA GRRKNKNSSA SQYHHVLMSD AFQAAHASAA 240 NGAHSATLGS KSTVLTFGSD SPLCESMASV LNLAEKNQNC MQNGFRGTEQ RLLVSPTAGD 300 NGDDRSSGSS ITASNSTERG GKANLQEPSA QNCQSFPPQV PCFPGSPWPY PCNSAQWASA 360 MPPPGFCHSG FPMAFYPAPP YWGCTVPGSW NVPCLSPSST LSHCATSSGS NSPTLGKHSR 420 DEDITNPSSS QNEEPVKDYS SKRCVCIPKT LRIDHSNEAA RSSVWATLGI KNERGNCANE 480 GGGHFKAFQS RGDEKNPAVE ASSALQANPA AFSRSLNFHE RT

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MSSEGEGGGH TIKLFGKTIP LAMAPLNRES SSAIDEPCGS VEHDVTATAC GGGGGGAEDC  60
YETRQKLSSS SSAATNSGGD YLEREGDAQQ EETISGKELA ADKQDADTSD LITEDLKAPT  120
TSSGISENPK TPSADRETSC KNGDQSETSS SQDKTLKKPD KILPCPRCNS MDTKFCYYNN  180
YNVNQPRHFC KNCQRYWTAG GIMRNVPVGA GRRKNKNSSA SQYHHVLMSD AFQAAHASAA  240
NGAHSATLGS KSTVLTFGSD SPLCESMASV LNLAEKNQNC MQNGFRGTEQ RLLVSPTAGD  300
NGDDRSSGSS ITASNSTERG GKANLQEPSA QNCQSFPPQV PCFPGSPWPY PCNSAQWASA  360
MPPPGFCHSG FPMAFYPAPP YWGCTVPGSW NVPCLSPSST LSHCATSSGS NSPTLGKHSR  420
DEDITNPSSS QNEEPVKDYS SKRCVCIPKT LRIDHSNEAA RSSVWATLGI KNERGNCANE  480
GGGHFKAFQS RGDEKNPAVE ASSALQANPA AFSRSLNFHE RT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	6e-93	Dof family protein