PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011983.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 464aa MW: 51747.8 Da PI: 7.8089

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011983.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.1	2.9e-52	17	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 + pGfrFhPtdeelv +yLk+kv++++l++ e ik++diyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s+ PCP011983.1 17 MLPGFRFHPTDEELVGFYLKRKVQQRPLSI-ELIKQLDIYKFDPWDLPKLAASGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSega 113 579*************************.89***********8888899***********************************9777 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfykgra kg+ktdW+mhe+rl PCP011983.1 114 csSSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 148 766667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MDERSDNIGG EKMDEVMLPG FRFHPTDEEL VGFYLKRKVQ QRPLSIELIK QLDIYKFDPW 60 DLPKLAASGE KEWYFYCPRD RKYRNSTRPN RVTGAGFWKA TGTDRPIYSS EGACSSSKCI 120 GLKKSLVFYK GRAAKGVKTD WMMHEFRLPS LTDSLPPKRS SSFMDKTIPA NDSWAICRIF 180 KKTNSSNAHQ RALSHHSWVS ALPETNTFGD HMLGSKGAHN ATHHHHEFSS ESMSILTSKT 240 NFPNNNDIQM SSTTSNIFPL DIYSNSYKPI NPLMMGCNVK LPYQHLPISS NFSNGSSDYF 300 SNPSFTFSTA QETSSGPAAK CTVDLSSLLL NMSSSMLGDY NCSNNVKGAS AESTNFDFST 360 TNRGFSSMAL PHHHEVMQGN NNNLGNGHDS ITGLIKNIQN VNSNVTEERD DQQWETSGRS 420 NIGFPLMSSL PLPMNVGGGD AWKSSLTWES SPCPSEMSTT RCYT

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MDERSDNIGG EKMDEVMLPG FRFHPTDEEL VGFYLKRKVQ QRPLSIELIK QLDIYKFDPW  60
DLPKLAASGE KEWYFYCPRD RKYRNSTRPN RVTGAGFWKA TGTDRPIYSS EGACSSSKCI  120
GLKKSLVFYK GRAAKGVKTD WMMHEFRLPS LTDSLPPKRS SSFMDKTIPA NDSWAICRIF  180
KKTNSSNAHQ RALSHHSWVS ALPETNTFGD HMLGSKGAHN ATHHHHEFSS ESMSILTSKT  240
NFPNNNDIQM SSTTSNIFPL DIYSNSYKPI NPLMMGCNVK LPYQHLPISS NFSNGSSDYF  300
SNPSFTFSTA QETSSGPAAK CTVDLSSLLL NMSSSMLGDY NCSNNVKGAS AESTNFDFST  360
TNRGFSSMAL PHHHEVMQGN NNNLGNGHDS ITGLIKNIQN VNSNVTEERD DQQWETSGRS  420
NIGFPLMSSL PLPMNVGGGD AWKSSLTWES SPCPSEMSTT RCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-101	NAC family protein