PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011750.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 273aa    MW: 30004.1 Da    PI: 8.2351
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011750.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.53.3e-392282262
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 ++++l+cprC s ntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkks+
  PCP011750.1 22 PQEQLNCPRCSSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKST 82
                 6899******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MEDHEMGSNG CTRSVLEKRV RPQEQLNCPR CSSINTKFCY YNNYSLTQPR YFCKTCRRYW  60
TEGGTLRNVP VGGGSRKNKK STSSSASVSS KITIPDLNPP TTLSHFSSSH QNPRVTHEGQ  120
DLNLAFDSID AHYHGTTMEN NNSTNSSSAP NLSAMELLRT GIASRGVNSF MPTQNMPDHH  180
SNTVLCPPSS AGFLLQEFKP TSLGFCVDGL GNRYGGDDHE NVNGGRILFP FGDHHLKQIS  240
STAGHHEVLD RHQNKGQGNP TGYWNGLLGG GSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.26e-55Dof family protein