PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011679.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 274aa    MW: 29765.9 Da    PI: 9.333
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011679.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.26.9e-1486132354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r+h+++E+rRRdriN  +++Lr+l+Pk+      K++Ka+ L  +++++k+L
  PCP011679.1  86 RSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVIDHVKDL 132
                  78*************************8.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MDQNYYYAGT GVPSWSHQYN SAAAAAAISN ESSSSFLAPW PPPPPPPPPP HVSSSNQFQF  60
CGLPPSSWSS TAADGFEEDR AASASRSHSQ AEKRRRDRIN AQLATLRKLI PKSDKMDKAA  120
LLGSVIDHVK DLKRKAMEVS KSFVVPTEVD EVTIDCDPAH TVNSATSSTN KSRGSFLIRA  180
SVCCDDRPEL FSELIQVLKG LKLTAVRADM ASVGGRIKSV LVLCSKDGEE AVCTSTLKQS  240
LKLVLSKLAA SSMAPNCRIR SKRQRFFLPF HCPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.18e-40bHLH family protein