PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011442.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 315aa    MW: 34657.2 Da    PI: 6.5179
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011442.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.8e-184392255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  PCP011442.1 43 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 92
                 799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEFQFQQPKQ VSFAAAGIPK SSSKVGKLKG RNNNSRSNNN ANKFVGVRQR PSGRWVAEIK  60
DTTQKIRMWL GTFETAEEAA RAYDEAACLL RGSNTRTNFI THVSMDSPLA ARIRNLLNTK  120
KGGGATKQQL ALLQRSTSTS ASSSTSSDHD HLPPPSEQLV RKSTSSTSTS SSSDTTSLSR  180
EVFQDNSLLS DDVYKPDLRN CNEEFELSSS FNNSQSNLLS WGSYQTGVDH FSFAQQAFEF  240
PKHQAAAALS SAESTTTTST AGEADSELMD FERMKVERQI SASLYAMNGV QEYMETVHDP  300
SEALWDLPPL CSLFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-28ERF family protein