PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP011213.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 232aa MW: 26917.8 Da PI: 8.1891 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 62.8 | 1.1e-19 | 78 | 200 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyat.gkrknr.atksgyWkatgkdkevlskk 96 G+ F+P+d lv++yL++k+ + +l + + i+++d+y +P++L k k+ + ++ wyfF++++ ++++ g+ ++ ++ +g W g++ +vl+ + PCP011213.1 78 LGYTFNPEDGLLVCHYLREKCLDGDLLF-HSIEDADVYAKHPQNLIdKyKAVGARNVWYFFTRTRPNETQpGTSTSTeQVLAGKWI-IGNEMDVLH-Q 172 69***********************888.77**************732233346679*****99887775455555445669***8.8999****9.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ge+vg+k+ L + +g+a kt+ + ey+l PCP011213.1 173 GEKVGVKQLLEYCDGDA----KTQYKIIEYKL 200 99***********8776....56777777765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MVQRKSSRLQ SVKEQEKLET DPIELRKKQL ILDIREAGRI GDQNEQKRRI RWIRETEMMN 60 KLSKARKIRD LQVQLISLGY TFNPEDGLLV CHYLREKCLD GDLLFHSIED ADVYAKHPQN 120 LIDKYKAVGA RNVWYFFTRT RPNETQPGTS TSTEQVLAGK WIIGNEMDVL HQGEKVGVKQ 180 LLEYCDGDAK TQYKIIEYKL DPLPDNLKSG PWFVCKLYND ASCVEVQSLI NG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07680.2 | 1e-11 | NAC family protein |