PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010850.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 411aa MW: 46271.3 Da PI: 7.1712

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010850.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.2	1.6e-53	9	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+evd++k+ePwdL++ ++ + ++ewyfFs++d+ky+tg+r+nratk+g+Wkatg+dk + + PCP010850.1 9 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-EVIREVDLNKMEPWDLQErcRIGStPQNEWYFFSHKDRKYPTGSRTNRATKAGFWKATGRDKCIRN- 104 69**************************.99**********963433332556*********************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +++g++ktLvfy+grap+g+ktdW+mheyrle PCP010850.1 105 TFKQIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 138 8999**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MANSSSGGVP PGFRFHPTDE ELLHYYLKKK VSFQKFDMEV IREVDLNKME PWDLQERCRI 60 GSTPQNEWYF FSHKDRKYPT GSRTNRATKA GFWKATGRDK CIRNTFKQIG MRKTLVFYRG 120 RAPHGQKTDW IMHEYRLEDS DDPHGNLSSE DGWVICRVFK KKNLFKVANE GGSSSMNSSD 180 HQQLKNTSSN SQLQARSFMH SHGDNQYLLR QQLHAATQAF ELNNNPSLHY AHLQPPPHYS 240 PFQSQALIPT LAHKPLSAYD DYSSQLPSDD SPSHGMVKQL MTNPRDCESG SEGLRYQACE 300 PVLEVGTCEP NHQLNTVAGG AGAAGGRDNN HDHQGMSEWA MLDRLVTSHD LGNDQDSSSK 360 GAASYGIMGF VDGSTPCPPR FSDVISRDYE VVSDSTTARV ESDAFKIWKN A

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MANSSSGGVP PGFRFHPTDE ELLHYYLKKK VSFQKFDMEV IREVDLNKME PWDLQERCRI  60
GSTPQNEWYF FSHKDRKYPT GSRTNRATKA GFWKATGRDK CIRNTFKQIG MRKTLVFYRG  120
RAPHGQKTDW IMHEYRLEDS DDPHGNLSSE DGWVICRVFK KKNLFKVANE GGSSSMNSSD  180
HQQLKNTSSN SQLQARSFMH SHGDNQYLLR QQLHAATQAF ELNNNPSLHY AHLQPPPHYS  240
PFQSQALIPT LAHKPLSAYD DYSSQLPSDD SPSHGMVKQL MTNPRDCESG SEGLRYQACE  300
PVLEVGTCEP NHQLNTVAGG AGAAGGRDNN HDHQGMSEWA MLDRLVTSHD LGNDQDSSSK  360
GAASYGIMGF VDGSTPCPPR FSDVISRDYE VVSDSTTARV ESDAFKIWKN A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-142	NAC family protein