PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP010729.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | DBB | ||||||||
Protein Properties | Length: 240aa MW: 25895.8 Da PI: 6.4774 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 20.6 | 9.4e-07 | 4 | 47 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C +++H H++vpl PCP010729.1 4 LCNACEVAEAKVLCCADEAALCWACDQKIHAAnklaskHQRVPL 47 7******99*********************66899999999986 PP | |||||||
2 | zf-B_box | 28.7 | 2.8e-09 | 53 | 86 | 2 | 35 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35 ++kC+ ++e +fC +++ llC++C +++H PCP010729.1 53 PMPKCDICQEMVGYFFCLQDRALLCRKCDVAIHT 86 689********9********************93 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 240 aa Download sequence |
MKILCNACEV AEAKVLCCAD EAALCWACDQ KIHAANKLAS KHQRVPLSSS SSPMPKCDIC 60 QEMVGYFFCL QDRALLCRKC DVAIHTVNSY VSSHQRFVLT GVKVGLEATK PCISTSTKEM 120 LTSVETVSES ASSRPINKSP VGPFVGEIKQ ALPGKVDSVG TGVSGKLPLI QNANTSGSGS 180 NLEEFLGFTD PNQNFGVLDR MSPKLLEDDS GLNQISEGRL LEIASCRAVF SLFYFCDQVM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G78600.1 | 2e-67 | DBB family protein |