PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010676.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CPP

Protein Properties

Length: 682aa MW: 74191.1 Da PI: 6.8919

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010676.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	21.4	5e-07	432	456	17	41
TCR 17 YCeCfaagkkCseeCkCedCkNkee 41 YC+Cfaag +C e C+C++C+Nk + PCP010676.1 432 YCDCFAAGLYCIEPCSCQECFNKPN 456 **********************975 PP
2	TCR	51.3	2.3e-16	502	541	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnC+ks+ClkkYCeCf+ g+ C+ C+C +CkN+ PCP010676.1 502 RHKRGCNCRKSSCLKKYCECFQGGAGCGILCRCVGCKNTF 541 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MDTPLKNQIT PTTPLPAKYE DSPVFNYISN LSPIEPVNSA GNDHHTFNSL AFASLPSIFA 60 SPQNLSVPET RFLLRRHHFS DSPKPESFQS GNRNSKSDGV PVSVEQAYLG TDQPECFASG 120 SSSDVEEGTR FFERETHLRR IRRVEQKKDA AACDLVRLIS DDQLKFDLTT IKESCAGHDP 180 KPVDPGEISF MSNILRDNDI EVEESAGPID SSEECELGKV SNQPEGIRGT KETDQAPAIL 240 SGTLLDKLNV NDPSGIVDKR SLNCIHSSCK PSSQSYAIRR RCLDFERPAA HQRKSIDASG 300 GSLALPQSSC EVASVENQLV QTIKGCDYSS SRLPGIGLHL NALATSSESN LSKVVKHDIS 360 ESRATNFPNS KISSTSLTPS EVSRDESCKN KAQVAETPPQ VCAAVGQEHD CLGCSLLEKV 420 WLASAVTFSV CYCDCFAAGL YCIEPCSCQE CFNKPNYENI VLENRKLIES RNPLAFAPKV 480 TASAVAIPQH GEETNSTPSS ARHKRGCNCR KSSCLKKYCE CFQGGAGCGI LCRCVGCKNT 540 FGRKDESKQA EVGGDESVVP NMDALNVSLP TVRDQDLPMA RSRIFRPPRD QLTSSSNGKQ 600 KIFSLHSVVS SPQLEKHLQA IPEDGTLETL ASSGSYKSTS PNSKRVSPPH SGSEFGSAWR 660 GGRKLVLRSI PPFPTLESPR KQ

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MDTPLKNQIT PTTPLPAKYE DSPVFNYISN LSPIEPVNSA GNDHHTFNSL AFASLPSIFA  60
SPQNLSVPET RFLLRRHHFS DSPKPESFQS GNRNSKSDGV PVSVEQAYLG TDQPECFASG  120
SSSDVEEGTR FFERETHLRR IRRVEQKKDA AACDLVRLIS DDQLKFDLTT IKESCAGHDP  180
KPVDPGEISF MSNILRDNDI EVEESAGPID SSEECELGKV SNQPEGIRGT KETDQAPAIL  240
SGTLLDKLNV NDPSGIVDKR SLNCIHSSCK PSSQSYAIRR RCLDFERPAA HQRKSIDASG  300
GSLALPQSSC EVASVENQLV QTIKGCDYSS SRLPGIGLHL NALATSSESN LSKVVKHDIS  360
ESRATNFPNS KISSTSLTPS EVSRDESCKN KAQVAETPPQ VCAAVGQEHD CLGCSLLEKV  420
WLASAVTFSV CYCDCFAAGL YCIEPCSCQE CFNKPNYENI VLENRKLIES RNPLAFAPKV  480
TASAVAIPQH GEETNSTPSS ARHKRGCNCR KSSCLKKYCE CFQGGAGCGI LCRCVGCKNT  540
FGRKDESKQA EVGGDESVVP NMDALNVSLP TVRDQDLPMA RSRIFRPPRD QLTSSSNGKQ  600
KIFSLHSVVS SPQLEKHLQA IPEDGTLETL ASSGSYKSTS PNSKRVSPPH SGSEFGSAWR  660
GGRKLVLRSI PPFPTLESPR KQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22760.1	3e-76	CPP family protein