PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010661.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 386aa MW: 40853.8 Da PI: 8.4048

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010661.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.8	6.5e-40	42	102	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk + PCP010661.1 42 PEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIR 102 6899******************************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MMSSDAAQPA KPKDDENPTG GSGSSRPKTT SSSSSGPKLP PPEQALKCPR CDSPNTKFCY 60 YNNYSLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKK IRSSSSSNSR LSCSFDSSKD 120 SAGSSSSENM MLGGLKFFHG ISPAMDFQLG SISRLHNNNQ FSSNPAAGIN FNNPFSAFGD 180 VSGTSGLNIS THEPSAGGGT NACNNSFLGF NYPLTLGGGG GGASGSGGLI STQNMMSAMN 240 VHSSLASSIE SLSSINQDLH WKMQQQRLAM LIGTEEHDQS THSTQSQLEN QQKTQQMITP 300 ISLFQNLEVS SSSKPDHHQG VNHGRKEGGD TATEWFFGNS YVAPVTPTPT NSGGGGGAGG 360 NENASNWPHG IPAWSSHDLQ QYNALP

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MMSSDAAQPA KPKDDENPTG GSGSSRPKTT SSSSSGPKLP PPEQALKCPR CDSPNTKFCY  60
YNNYSLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKK IRSSSSSNSR LSCSFDSSKD  120
SAGSSSSENM MLGGLKFFHG ISPAMDFQLG SISRLHNNNQ FSSNPAAGIN FNNPFSAFGD  180
VSGTSGLNIS THEPSAGGGT NACNNSFLGF NYPLTLGGGG GGASGSGGLI STQNMMSAMN  240
VHSSLASSIE SLSSINQDLH WKMQQQRLAM LIGTEEHDQS THSTQSQLEN QQKTQQMITP  300
ISLFQNLEVS SSSKPDHHQG VNHGRKEGGD TATEWFFGNS YVAPVTPTPT NSGGGGGAGG  360
NENASNWPHG IPAWSSHDLQ QYNALP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	8e-45	Dof family protein