PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP010231.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 306aa    MW: 33352.8 Da    PI: 5.4058
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP010231.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA498.3e-16218253134
         GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C +Cg ++  Tp++Rrgp+g+++LCnaCGl+++ +g
  PCP010231.1 218 CKHCGISSksTPMMRRGPSGPRSLCNACGLFWANRG 253
                  *****99999**********************9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MTIDSIREPP PISMYGHSQD MTMPNPIPAC DDDDAGAADS IDNAHIQYDS HTLEDGGIVV  60
VEDVSSDGVY VQGGSASSEL RGPPYDGSSQ LTLSFRGQVF VFDAVTPEKV QAVLLLLGGN  120
ELSPNAQGTE LASQNQRATE DYPRCSQPHR AASLFRFRQK RKERCFDKKV RYGVRQEVAL  180
RMQRNKGQFS SSKRSDGDSN WSAGQESGQE DCHAETSCKH CGISSKSTPM MRRGPSGPRS  240
LCNACGLFWA NRGGLRELSK RSHDIKRIEQ GGEPDTKDLD SVTAIDAHDN LVPFSNGDNS  300
ALVAEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.24e-86GATA family protein