PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP010231.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 306aa MW: 33352.8 Da PI: 5.4058 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49 | 8.3e-16 | 218 | 253 | 1 | 34 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 C +Cg ++ Tp++Rrgp+g+++LCnaCGl+++ +g PCP010231.1 218 CKHCGISSksTPMMRRGPSGPRSLCNACGLFWANRG 253 *****99999**********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MTIDSIREPP PISMYGHSQD MTMPNPIPAC DDDDAGAADS IDNAHIQYDS HTLEDGGIVV 60 VEDVSSDGVY VQGGSASSEL RGPPYDGSSQ LTLSFRGQVF VFDAVTPEKV QAVLLLLGGN 120 ELSPNAQGTE LASQNQRATE DYPRCSQPHR AASLFRFRQK RKERCFDKKV RYGVRQEVAL 180 RMQRNKGQFS SSKRSDGDSN WSAGQESGQE DCHAETSCKH CGISSKSTPM MRRGPSGPRS 240 LCNACGLFWA NRGGLRELSK RSHDIKRIEQ GGEPDTKDLD SVTAIDAHDN LVPFSNGDNS 300 ALVAEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.2 | 4e-86 | GATA family protein |