PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP010082.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 269aa    MW: 29571.3 Da    PI: 7.8104
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP010082.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.42.6e-20153187135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  PCP010082.1 153 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 187
                  ********************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MHRCSSGSSH GGNMVGSPCS CGVLHHTQSN SSFSTLFSMP NHHKPYDHIH HEASDDHHHM  60
YQFASPSSSV DCTLSLGTPS TRLTDNDVVS DDRHSRNGER RSGNCVSNFC WDLLQPNKSS  120
PSSHHKNSNR GGNINGVTNA GSGNNDPLLA RRCANCDTTS TPLWRNGPRG PKSLCNACGI  180
RFKKEERRAT AAAASGGGSS VIGMESNGYH HHNSWIPHSQ TQKMPCFGNE FRFMEDDTAH  240
HENDINGIPF LSWRLNVTDR PSLVHDFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.13e-56GATA family protein