PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP010082.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 269aa MW: 29571.3 Da PI: 7.8104 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.4 | 2.6e-20 | 153 | 187 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++ PCP010082.1 153 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 187 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence |
MHRCSSGSSH GGNMVGSPCS CGVLHHTQSN SSFSTLFSMP NHHKPYDHIH HEASDDHHHM 60 YQFASPSSSV DCTLSLGTPS TRLTDNDVVS DDRHSRNGER RSGNCVSNFC WDLLQPNKSS 120 PSSHHKNSNR GGNINGVTNA GSGNNDPLLA RRCANCDTTS TPLWRNGPRG PKSLCNACGI 180 RFKKEERRAT AAAASGGGSS VIGMESNGYH HHNSWIPHSQ TQKMPCFGNE FRFMEDDTAH 240 HENDINGIPF LSWRLNVTDR PSLVHDFTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50870.1 | 3e-56 | GATA family protein |