PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP009923.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 844aa MW: 95669.2 Da PI: 5.6208

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP009923.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.3	6.3e-53	54	176	6	128
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 rFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s ++++vg PCP009923.1 54 RFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-QTRAVG 149 9**********************.99***********6434555777**********************************.9999 PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +kktLv+y+grap+g +tdWvmheyrl PCP009923.1 150 MKKTLVYYRGRAPHGIRTDWVMHEYRL 176 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 844 aa Download sequence
MTECGKSGDE HVKRTVLSYN AAEIRFRGFS LRKDTCLHKG PVMPPIRHLH VEQRFHPTDE 60 ELVAYYLKRK INGRKIELEV IPEVDLYKCE PWDLPGKSLL PSKDLEWYFF SPRDRKYPNG 120 SRTNRATKAG YWKATGKDRK VNSQTRAVGM KKTLVYYRGR APHGIRTDWV MHEYRLDERE 180 CETAQGLQVQ DAYALCRIFK KTATGPKIGE HYGSTSTTSY QLTSDHSSSV NELYSDGGRC 240 EDFESSSYPM QMNNACSSSP NFVHTNSLDD MGRKRDGKWT QFLSKDAFNC SSSFSHISTH 300 GNIAYPPSKV DIALECARLQ HRLSLPPLEV EDFSQVGLTD FKTMQYSNPI PDTTSTETDA 360 LQEILSVAHV SQEMINQSSN LVDQTWGGNY APPANDFSFM VDRDAQYNQI TGHMNSMRYV 420 DDKTWGNSYT RSIEIGDLED DFRMDNTAEN LRWIGMSDKD LEKIHMASSS SSYSFKSSWV 480 QRFVPFFVAV WLFFSYDCHG IIGANAATAP VKVNGNISKV VDAVNFHIYY GQTFKVIKNS 540 IDGKSYLLIQ LLGLLGSLKG ITSNSVASQC VLKLYEAGEI DLIPNGEPEQ VAKFAAHFIT 600 NIDQPQACNF ASFVPYGEDN PLQRAEWIKF LGVFANVESR ANQVYDAVTQ NYQCLTKLAK 660 NRTSFKPTVA WMEYDNDTWS FAKETYKLKY VEDAFGENVD DSINKNTYNI SSPDDLDALH 720 AILCTVDVVI DETYTWDPVM YNSSTFLQNI NVEDHSCFAF LSNQSIWRYD KRVQNSTALD 780 WYNGAISQPQ LVLADLLEVL FPTGNYTTTY FRNIAKDEGV VNITSEMCDR DISSAMEPTL 840 PACA

Sequence ? help Back to Top

Protein Sequence Length: 844 aa Download sequence

MTECGKSGDE HVKRTVLSYN AAEIRFRGFS LRKDTCLHKG PVMPPIRHLH VEQRFHPTDE  60
ELVAYYLKRK INGRKIELEV IPEVDLYKCE PWDLPGKSLL PSKDLEWYFF SPRDRKYPNG  120
SRTNRATKAG YWKATGKDRK VNSQTRAVGM KKTLVYYRGR APHGIRTDWV MHEYRLDERE  180
CETAQGLQVQ DAYALCRIFK KTATGPKIGE HYGSTSTTSY QLTSDHSSSV NELYSDGGRC  240
EDFESSSYPM QMNNACSSSP NFVHTNSLDD MGRKRDGKWT QFLSKDAFNC SSSFSHISTH  300
GNIAYPPSKV DIALECARLQ HRLSLPPLEV EDFSQVGLTD FKTMQYSNPI PDTTSTETDA  360
LQEILSVAHV SQEMINQSSN LVDQTWGGNY APPANDFSFM VDRDAQYNQI TGHMNSMRYV  420
DDKTWGNSYT RSIEIGDLED DFRMDNTAEN LRWIGMSDKD LEKIHMASSS SSYSFKSSWV  480
QRFVPFFVAV WLFFSYDCHG IIGANAATAP VKVNGNISKV VDAVNFHIYY GQTFKVIKNS  540
IDGKSYLLIQ LLGLLGSLKG ITSNSVASQC VLKLYEAGEI DLIPNGEPEQ VAKFAAHFIT  600
NIDQPQACNF ASFVPYGEDN PLQRAEWIKF LGVFANVESR ANQVYDAVTQ NYQCLTKLAK  660
NRTSFKPTVA WMEYDNDTWS FAKETYKLKY VEDAFGENVD DSINKNTYNI SSPDDLDALH  720
AILCTVDVVI DETYTWDPVM YNSSTFLQNI NVEDHSCFAF LSNQSIWRYD KRVQNSTALD  780
WYNGAISQPQ LVLADLLEVL FPTGNYTTTY FRNIAKDEGV VNITSEMCDR DISSAMEPTL  840
PACA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-121	NAC family protein