PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP009846.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 292aa MW: 31371.4 Da PI: 9.6862

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP009846.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.7	5.2e-38	28	87	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++ +cprC+s+ntkfCyynnyslsqPryfCkaCrryWt+GG+lrnvPvGgg+rk k++ PCP009846.1 28 NQQPHRCPRCQSMNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNVPVGGGCRKGKRA 87 678999**************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MQQQQQEGGE QKEQQNQDQR LKAAEQQNQQ PHRCPRCQSM NTKFCYYNNY SLSQPRYFCK 60 ACRRYWTQGG TLRNVPVGGG CRKGKRAKGG SSSASASRTV QPQPPQKEQN VQNNLGIGGG 120 SVGMSTANPS GGLAIHHQYY PGSSHGYLSP FAGLQSLSQS QPFNVGGGHD PASNMSLLQG 180 FNLSVPMVAL QPQQRQQFFQ MGGSRSNNLL DQAALYPSEH DQWAPQSVVN RSSVNPSSSA 240 AAAASDSALW TMGNNNPITT TTTTTTASSS SGGPSLNPKQ WPDLPGSYGS PN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-25	Dof family protein