PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP009845.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | SBP | ||||||||
Protein Properties | Length: 127aa MW: 14137.3 Da PI: 4.3256 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 71.8 | 1.3e-22 | 80 | 127 | 1 | 48 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 +C+v++C+adls++k+y+rrhkvC+vh+kap+vl+ g +qrfCqqCsr PCP009845.1 80 CCKVDSCNADLSDLKQYYRRHKVCDVHAKAPAVLMGGFRQRFCQQCSR 127 6**********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MESGRAHGKS TLVKSEEEEE EEEEEEEEEE EEEEEESRSG TPSIVDGEDE RRDTVMMMNS 60 TAPSPTGRRS GAGGSTAGPC CKVDSCNADL SDLKQYYRRH KVCDVHAKAP AVLMGGFRQR 120 FCQQCSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60030.1 | 2e-19 | SBP family protein |