PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009843.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SBP
Protein Properties Length: 118aa    MW: 13076.6 Da    PI: 6.7492
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009843.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP71.61.4e-2271118148
                  --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
          SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 
                  +C+v++C+adls++k+y+rrhkvC+vh+kap+vl+ g  qrfCqqCsr
  PCP009843.1  71 CCKVDSCNADLSDLKQYYRRHKVCDVHAKAPAVLMGGFLQRFCQQCSR 118
                  6**********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MESGRAHGKK TWVKYKEEEE GEEEEEESRS GTPSIVDGED ERRDTVMMMN STAPSPKGRR  60
SGAGGSTAGP CCKVDSCNAD LSDLKQYYRR HKVCDVHAKA PAVLMGGFLQ RFCQQCSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60030.15e-20SBP family protein