PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009826.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 327aa    MW: 36699.1 Da    PI: 8.4794
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009826.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1095.5e-34551951128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgy 82 
                  lp+G++F+Ptd+e++ ++L++kv +++      ++  e   +++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + +
  PCP009826.1  55 LPAGVKFDPTDQEIL-QHLEAKVLSDTrklhplID--EfipTLEGEnGICYTHPEKLP-GVNKDGQIRHFFHRPSKAYTTGTRKRRKVHteedgsETR 148
                  799***********9.99****9999956644322..22222333336**********.666777788******************744446555778 PP

          NAM  83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                  W++tgk+++vl+ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  PCP009826.1 149 WHKTGKTRPVLV-GGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 195
                  ************.9*************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MTWCNDSDDE RAIQIVSPPP PNNPNNPNEF RNITCPSCGH HIEFDQAGIH DLPGLPAGVK  60
FDPTDQEILQ HLEAKVLSDT RKLHPLIDEF IPTLEGENGI CYTHPEKLPG VNKDGQIRHF  120
FHRPSKAYTT GTRKRRKVHT EEDGSETRWH KTGKTRPVLV GGAVKGFKKI LVLYTNYGRQ  180
RKPEKTNWVM HQYHLGNNEE EKDGELVVSK VFYQTQPRQC GSSIKDVPTF DHHKGVNIRS  240
GQGNDGLISA ATTNPLPLAK KAGLVEYYNP GGPFMNYDHH QHNHNQGGHN RESPPQLIPN  300
LVVQGDGSSF IRLTSDASKG KLERKIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-124NAC family protein