PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009814.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 263aa    MW: 29471 Da    PI: 5.1455
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009814.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-19125175255
          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIrd    + k +r++lg+f tae+Aa a+++a+++++g
  PCP009814.1 125 HYRGVRRRP-WGKYAAEIRDsT--R-KGARVWLGTFETAEDAALAYDKAALRIRG 175
                  8********.**********32..2.24*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MTVHCDIPAE KPASEAIQLE DVWASFIGVN GVKREAKSAT ESQSWEDMPP LDGREGSMEV  60
LQRLPSLGRW ISMGTEAWEK LLDSGVAPAQ NTEQSCNDKL EGNGAANSEC EAKVERAKKV  120
EFTKHYRGVR RRPWGKYAAE IRDSTRKGAR VWLGTFETAE DAALAYDKAA LRIRGSKAHL  180
NFPLETVARA MGLDCFSICS STNIGSNTWK RGLRDWEENV EERKPAEKRK ASMQKMLGDH  240
DEFDVFEFQD LGSDYLDSLL SSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.19e-34ERF family protein