PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP009760.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ARR-B

Protein Properties

Length: 766aa MW: 85164.4 Da PI: 5.4029

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP009760.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	60.5	3.6e-19	257	306	5	55
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +Wt+eLH +F a++ L G +kA P++il+ m+v ++t+ +v+SHLQ+YR PCP009760.1 257 VWTTELHLKFTAAISAL-GDQKARPRRILKWMNVADITVRQVASHLQRYRK 306 7**************.9*****************************6 PP
2	Myb_DNA-binding	23.5	1.3e-07	257	305	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WTte+++++ a+ lG ++++I + m+ t q+ s++q y+ PCP009760.1 257 VWTTELHLKFTAAISALGDQkaRPRRILKWMNvADITVRQVASHLQRYR 305 6***************99*********99**********97 PP
3	Response_reg	26.4	3.5e-10	71	130	48	109
EEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 48 llDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 + i+mp+ d + ll+ ++e+e +p+i+++++ + + a++al Ga fl Kp++ e+l + PCP009760.1 71 MANISMPDKDRFSLLRVLHENE--IPVIFMSSEVNIDVAKKALAEGACFFLQKPVSSEDLKN 130 5679**************98..********************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence
MSLIQASGSR AFSVALSFVV IVLASMEDMS PKESNGLPSF AHGLQILVVD HDTLSLMGTA 60 STLEKYSFKV MANISMPDKD RFSLLRVLHE NEIPVIFMSS EVNIDVAKKA LAEGACFFLQ 120 KPVSSEDLKN VWQHAYRKVR NPRRDTHKTN CGKKIHEAGG VLRPPTGGIR IHEVGGVSRL 180 PTGRDLCLDT QDTRNEPQIA AENYTQGALG INRPVDDKED QEKAKKVKLN TQQDCDEEGM 240 ENQDCDDSSK QKKRHPVWTT ELHLKFTAAI SALGDQKARP RRILKWMNVA DITVRQVASH 300 LQRYRKNVHR IQEVGTTSLP SLGKSSIWNN RNEFPPARQT SLVCRRYEQG TSSSGAQGNP 360 TQLMTPNSFT GFNDYGRQNL YTEHRVMSHN TNHQSESLYD FYLRTQGKFE NLDQILETNS 420 FTLGADMNEI ERNQPLGLEE IMFKASERNL QSTNYMTPEF GSPYIPANTF QVLNASVSMN 480 QAQNYCPEPT APFNAQNQDH FSAEATRTAE VGLNQAQFYA PAPTTPINSQ NQSHFSAEAT 540 RTTEVGMNQA QFYAPAPTTP INSQHQCHFS AEATRTTEVG MNQAQYYAPA PTTPINSQNQ 600 NHFSAEATGT TEVGMNQAQF YAPALTTPIN SQNQNYFSAD VMGTTEAGMN QPQYYTPAPT 660 APLYFQSQNH FSAEVTGTTD VLEVVPEQIP SVNATNAETF PSNFTGGSQE LDAAAREAHP 720 ASSNNNQPMS EYDDLLKLLE EDPEKFNWFE PFDSAPNAGD ANCCRE

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence

MSLIQASGSR AFSVALSFVV IVLASMEDMS PKESNGLPSF AHGLQILVVD HDTLSLMGTA  60
STLEKYSFKV MANISMPDKD RFSLLRVLHE NEIPVIFMSS EVNIDVAKKA LAEGACFFLQ  120
KPVSSEDLKN VWQHAYRKVR NPRRDTHKTN CGKKIHEAGG VLRPPTGGIR IHEVGGVSRL  180
PTGRDLCLDT QDTRNEPQIA AENYTQGALG INRPVDDKED QEKAKKVKLN TQQDCDEEGM  240
ENQDCDDSSK QKKRHPVWTT ELHLKFTAAI SALGDQKARP RRILKWMNVA DITVRQVASH  300
LQRYRKNVHR IQEVGTTSLP SLGKSSIWNN RNEFPPARQT SLVCRRYEQG TSSSGAQGNP  360
TQLMTPNSFT GFNDYGRQNL YTEHRVMSHN TNHQSESLYD FYLRTQGKFE NLDQILETNS  420
FTLGADMNEI ERNQPLGLEE IMFKASERNL QSTNYMTPEF GSPYIPANTF QVLNASVSMN  480
QAQNYCPEPT APFNAQNQDH FSAEATRTAE VGLNQAQFYA PAPTTPINSQ NQSHFSAEAT  540
RTTEVGMNQA QFYAPAPTTP INSQHQCHFS AEATRTTEVG MNQAQYYAPA PTTPINSQNQ  600
NHFSAEATGT TEVGMNQAQF YAPALTTPIN SQNQNYFSAD VMGTTEAGMN QPQYYTPAPT  660
APLYFQSQNH FSAEVTGTTD VLEVVPEQIP SVNATNAETF PSNFTGGSQE LDAAAREAHP  720
ASSNNNQPMS EYDDLLKLLE EDPEKFNWFE PFDSAPNAGD ANCCRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-29	ARR-B family protein