PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009352.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 426aa    MW: 48204.4 Da    PI: 4.3644
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009352.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.84.5e-1591513128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpk........kvkaeek.ewyfFskrdkkyatgkrknratk.sgyW 83 
                  pG+rF+Ptd+elv  +L+  + +++      + +++++++++  +k++P+++ +        ++ a+++  +yfFs+ +kk++ g++  r++   g+W
  PCP009352.1   9 PGLRFKPTDQELVGGFLHYFLVKTQrllppPPHSTFMHKCNLfgNKFQPSQIWEafgggaalQLGATDQpAMYFFSELKKKTPMGSNVDRMMGlGGTW 106
                  9*************99999877776688875555679***9833589*****74478888764444444488******************655599** PP

          NAM  84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  + +     +  +  +++ +gl++t+ + +  + +  +  W ++ey+l
  PCP009352.1 107 EGKSVPAWIEGTegNSTCIGLRRTFWYKN--EGSEDHGGWKLDEYSL 151
                  *99998888877556666*******9973..3333589*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MENHSLARPG LRFKPTDQEL VGGFLHYFLV KTQRLLPPPP HSTFMHKCNL FGNKFQPSQI  60
WEAFGGGAAL QLGATDQPAM YFFSELKKKT PMGSNVDRMM GLGGTWEGKS VPAWIEGTEG  120
NSTCIGLRRT FWYKNEGSED HGGWKLDEYS LFASPRKRNS HTSYDFDFVL CRLRNTSGIN  180
KRKCSTSYSQ DDEVPKMKKK RANEEIEQDM HAINVFDEEG RQDNSCLTSN FVLSDQENNE  240
FMVGDYVDYG YDDNDPRFTI TADELDDVLS KEPTDGAVEA PFPTAYASEE LLLGKERKDV  300
QLPVSSVVAD RGVEDQALYT NMSGEFIPET RELPLPASSG TAEDGTVEEK AWDPSLLEQY  360
WLSETQEEEP RNPSFYRDFM FADGGGVEEA YHPSAFDNVL DQSLFGSSYL NSYSFTEDQF  420
MPHILM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181201KRKCSTSYSQDDEVPKMKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.15e-08NAC family protein