PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009253.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 301aa    MW: 33899.9 Da    PI: 8.9946
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009253.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20191242256
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                  +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAa+a+++a+ kl+g+
  PCP009253.1 191 HYRGVRQRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAARAYDRAAFKLRGA 242
                  8********.**********9...4334**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MALDQVSALE LIKHHLLGEF SPVKSCATEP SDPGSSFTQN QWSAKDNSDL SRSQSESFCS  60
KSSSTFDSSI EISDYLDSSD IFEFNSAGFF DFEEKPQAID LTTPKSTNLS SQNSFKFDSK  120
PLVSDDYFEF EQKPQILKQT DPKPANSIRK PALTISLPNK TEWIQFASSD QAAVKPATVQ  180
KARSNEEKKK HYRGVRQRPW GKYAAEIRDP NRRGSRVWLG TFDTAIEAAR AYDRAAFKLR  240
GAKSILNFPL EAGKAEPVAS VERKRRRQEH REDAKAVVAV KKEKLTETPL TPSSWMAFWD  300
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1263267RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-52ERF family protein