PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009195.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SRS
Protein Properties Length: 319aa    MW: 33149.6 Da    PI: 5.7322
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009195.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70281.71.9e-25202260104153
       DUF702 104 s.........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                  +         lP +v+++avf+cvrv++v+dge+e+aYq++v+i+GhvfkG+LydqG++
  PCP009195.1 202 TpadagfkdpLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKINGHVFKGFLYDQGVD 260
                  1233455557***********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MALLYSSQPH ELDYGLGFLD LWMFAGFWVC VLVVATTRRL PSDSGAFADW VGSSSSNNGA  60
ATGRSTTHHP DIDVLSLGFN AGPAPAGPSS ASPSTMSMWS SAPSSRPLTY GHVPPEMAGM  120
VGLRDVFVVA PAAAYHHNTH LHHHYGHDPN LLSSSDHHHS INASNNPATA LGVGVIPLLT  180
AAPCLAPSNM SNVNDDDEDT HTPADAGFKD PLPGQVRAPA VFKCVRVTAV EDGEDEYAYQ  240
AVVKINGHVF KGFLYDQGVD GRDGFPNISE LHLGGGGGTS SGGNGRRNAA SSPILDPSDV  300
YAASGAGLLG GSNFGNPIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.11e-32SRS family protein