PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009126.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 338aa    MW: 38482.9 Da    PI: 6.948
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009126.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM141.54.8e-44181451128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                  lppG+rF Ptd+el+ +yL +kv +++l++ + ++ v++y+++P+dL  +    +e+ewyfF++r++ky++g r+ ra+++gyWkatgk  ++++ +g
  PCP009126.1  18 LPPGYRFVPTDDELILHYLMRKVLNEQLPI-NRFRIVNLYDHHPRDLTgEYNLIRESEWYFFTSRRRKYPKGGRPCRAADNGYWKATGKPDDIKDDNG 114
                  79****************************.7799************9444445889***************************************** PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                  +++g k+tL +y+g++ kg+ktdW mhey+l
  PCP009126.1 115 QVIGSKRTLDYYEGKQGKGTKTDWKMHEYKL 145
                  *****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MVPVLNEEGP VDAYIDSLPP GYRFVPTDDE LILHYLMRKV LNEQLPINRF RIVNLYDHHP  60
RDLTGEYNLI RESEWYFFTS RRRKYPKGGR PCRAADNGYW KATGKPDDIK DDNGQVIGSK  120
RTLDYYEGKQ GKGTKTDWKM HEYKLNKETA PSNQIDGTNM KLDDCVLCKI YKNSRIKKDG  180
KNNDDNAPES TIRTDQGAIL PAVTNTVTSH AFPDQSIQHP YLLTGESSGT TSSIVNKHCV  240
TSTSTTPAYY EQHYFQNQTC SDHPGPIYNC NNQIPPPREP FSSQFPLPNS IEHQIGTGWE  300
SVNGMPVVDS SSIRLLPHVR EYEHALKAMR NNEGQGTW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.29e-44NAC family protein