PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP008686.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 257aa MW: 29808.9 Da PI: 7.903 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 54 | 5.7e-17 | 104 | 227 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyat.gkrknr.atksgyWkatgkdkevlskk 96 G+ F+P d l++++L++k+ ++ l + +++e+d+y +P++L + ++ a + yfF++++ ++++ ++ + +++g W gk+ +vl+ + PCP008686.1 104 LGYTFNPDDGILLHHHLREKCLENALGFYAILEEADVYAKHPQNLIEnyRALAAGNVRYFFTRSRPNETQpDTSTGTdHVQAGHWI-FGKELDVLH-Q 199 69**************************999**************7423444466778***998877765333333346789***8.8999****9.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ge+vg+k+ L + g kt+ + eyrl PCP008686.1 200 GEKVGVKQLLEYC----AAGAKTRYKIIEYRL 227 99**********9....67889********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MVKRKTSTNN TSTVRVRVES DKDEEILGTD KLELRKLKRI REQEESLKIS YRRAEELERQ 60 ELERLARVSS SFAACRLEIQ AAEIFRKQVE ALKKRELEKR LISLGYTFNP DDGILLHHHL 120 REKCLENALG FYAILEEADV YAKHPQNLIE NYRALAAGNV RYFFTRSRPN ETQPDTSTGT 180 DHVQAGHWIF GKELDVLHQG EKVGVKQLLE YCAAGAKTRY KIIEYRLDPC PDNLKDGPWF 240 LCKLYNDGSY MEVQSSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63790.1 | 8e-12 | NAC family protein |