PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008604.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 466aa MW: 51119.2 Da PI: 7.194

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008604.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	60	7.9e-19	35	168	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr.atksgyWkat 86 +p GfrFhPtd++l++++L ++v +++ ++ ++ i e+d++ k+ Pw + +v + ++++fF++ ++++ + r +r + + g+W+++ PCP008604.1 35 MPLGFRFHPTDQDLISFFLYHRVLHREslmayCSNFKLIYEFDLFgKTPPWVVWEnfggpCV--DAQDLFFFCQLKNRS--EARIKReIDAGGTWSES 128 699*******************9998988866778998736788998652443333..67899*998765..5688885566899987 PP NAM 87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+v++ +++ +g k+ L + +a + dW+++ey++ PCP008604.1 129 NS-KPVKDLqNEKPIGKKRNLRYE--KAGCEHDGDWLLEEYSI 168 66.66665438889*******8..55555699*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MNRRPNDVLT MEEEGYGGIV PLGFYENPLL GSNGMPLGFR FHPTDQDLIS FFLYHRVLHR 60 ESLMAYCSNF KLIYEFDLFG KTPPWVVWEN FGGPCVDAQD LFFFCQLKNR SEARIKREID 120 AGGTWSESNS KPVKDLQNEK PIGKKRNLRY EKAGCEHDGD WLLEEYSILP SVVGGTDDSD 180 HEIGKVVLCR LKKNSRSRNK KSCSNATQHV NEERAKKRAR KEVKEKPVKK RARKEANEKL 240 AKTKARNEVG SQYTASVIAH TIDESNYKMI SYATNDDQQC ISNIDGSTMP ANFSDHDYVP 300 ISLIKEGWLL LPGITLPFIL ADKLAKEGMV VSVPIASEKS GHGVLLEEVD GKANGHEALE 360 KYSSIGGCDG SYGSEDRQVV AVVDAVVDAV ACVVVKIWKK SSACGGCGGG CGGCSGGVED 420 IVLVVVAAAA GVPGCSRAFS TLMIKTALPV TEPNAFPQFK TSFSSI

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MNRRPNDVLT MEEEGYGGIV PLGFYENPLL GSNGMPLGFR FHPTDQDLIS FFLYHRVLHR  60
ESLMAYCSNF KLIYEFDLFG KTPPWVVWEN FGGPCVDAQD LFFFCQLKNR SEARIKREID  120
AGGTWSESNS KPVKDLQNEK PIGKKRNLRY EKAGCEHDGD WLLEEYSILP SVVGGTDDSD  180
HEIGKVVLCR LKKNSRSRNK KSCSNATQHV NEERAKKRAR KEVKEKPVKK RARKEANEKL  240
AKTKARNEVG SQYTASVIAH TIDESNYKMI SYATNDDQQC ISNIDGSTMP ANFSDHDYVP  300
ISLIKEGWLL LPGITLPFIL ADKLAKEGMV VSVPIASEKS GHGVLLEEVD GKANGHEALE  360
KYSSIGGCDG SYGSEDRQVV AVVDAVVDAV ACVVVKIWKK SSACGGCGGG CGGCSGGVED  420
IVLVVVAAAA GVPGCSRAFS TLMIKTALPV TEPNAFPQFK TSFSSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	9e-13	NAC family protein