PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008386.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 280aa    MW: 31453.4 Da    PI: 8.1113
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008386.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.9e-192878155
          AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +++ GVr+++ +g+WvAeI+d      k+ r +lg+f taeeAa+a+++a+  l+g
  PCP008386.1 28 CKFVGVRQRP-SGKWVAEIKDtT----KKIRMWLGTFETAEEAARAYDEAAYLLRG 78
                 799*******.7*********33....36**********************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MEHQAPKQQK GVLANKQRKF KERTKSKCKF VGVRQRPSGK WVAEIKDTTK KIRMWLGTFE  60
TAEEAARAYD EAAYLLRGSN TRTNFATHVP SNSPLSLKIR NLLNQKKSLK QCPVSSTPNS  120
LNSTPTATST RTSNKYTSFS DGSAISIATF SETFLPNCKS QKNVQVFDDA YRPDISNCID  180
DLQPELFRNH FGLQWPLLTG FDQLPITHEG MDLAKGNAVT VQPSVAVEPE VTEFECLEVE  240
RQMSASFYTM NAVNEYFDNE YNAGDALWDL PSLSQPFCLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-50ERF family protein