PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008304.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 578aa MW: 64737.6 Da PI: 5.3998

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008304.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6.1e-09	295	329	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+++gL++rq+ +WF N+R ++ PCP008304.1 295 KWPYPTEADKIALAESTGLDQRQINNWFINQRKRH 329 569*****************************885 PP
2	ELK	25.7	2.6e-09	249	270	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++L+r ++++L++Lk EFs PCP008304.1 249 DLKDRLMRRFGSHLSTLKLEFS 270 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MEEMYGLQST ADYGDTGFQS TTEYDDRGAL MTPENLILPL DYHSLLHSSV AFREHNHHQH 60 QREAMFGSND IVLYSAASEA ASTIIAQREE DVFSAIKTRI ASHPTYPRLI HAYIECQKVG 120 APPEIASFLD EFRRENGLYK TQGEYSCNSS SMSSSTCLGA DPELDEFMET YCDILVKYKS 180 DLSRPFDEAT SFLSKIETQL TNLCTSSSAH ASSSVRTLCD EGGGMSSDED FSGGGIDVQE 240 AQQGGEDRDL KDRLMRRFGS HLSTLKLEFS KKKKKGKLPK EARQTLLDWW STHYKWPYPT 300 EADKIALAES TGLDQRQINN WFINQRKRHW RPSENMQFEP VGAYPVFGSD AVRSGPAGPP 360 PHCPSMITAK MGESVLDFCS GNGDLAFLLS EKVGSNGKVI GLDFLKEQLS VASSRQNLKS 420 KACYLNIEYQ HYITENNRSC YALHLVRWVE GDATDLPFSD RHFDVITIGY GLRNVVDKYK 480 AMEEMFRVLK AGSRVSIRDF NKSTNPVVSA VQELMIDNLV VPVASGFGLE DDYKYLKSSV 540 RAFLTGDELE NLALDVGFSN ARYYEIGRSL IGNLVATR

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MEEMYGLQST ADYGDTGFQS TTEYDDRGAL MTPENLILPL DYHSLLHSSV AFREHNHHQH  60
QREAMFGSND IVLYSAASEA ASTIIAQREE DVFSAIKTRI ASHPTYPRLI HAYIECQKVG  120
APPEIASFLD EFRRENGLYK TQGEYSCNSS SMSSSTCLGA DPELDEFMET YCDILVKYKS  180
DLSRPFDEAT SFLSKIETQL TNLCTSSSAH ASSSVRTLCD EGGGMSSDED FSGGGIDVQE  240
AQQGGEDRDL KDRLMRRFGS HLSTLKLEFS KKKKKGKLPK EARQTLLDWW STHYKWPYPT  300
EADKIALAES TGLDQRQINN WFINQRKRHW RPSENMQFEP VGAYPVFGSD AVRSGPAGPP  360
PHCPSMITAK MGESVLDFCS GNGDLAFLLS EKVGSNGKVI GLDFLKEQLS VASSRQNLKS  420
KACYLNIEYQ HYITENNRSC YALHLVRWVE GDATDLPFSD RHFDVITIGY GLRNVVDKYK  480
AMEEMFRVLK AGSRVSIRDF NKSTNPVVSA VQELMIDNLV VPVASGFGLE DDYKYLKSSV  540
RAFLTGDELE NLALDVGFSN ARYYEIGRSL IGNLVATR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-109	TALE family protein