PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007704.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

E2F/DP

Protein Properties

Length: 448aa MW: 49090.1 Da PI: 4.6647

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007704.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.3	2.3e-27	142	207	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r ++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg PCP007704.1 142 RFDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207 6789****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MSGSRAPNPP AQPPQPVMQQ PLKRQLPFSS MKPPFSAAAD YHGFLPDPRQ TTDQETYGIT 60 VKTPLKRKSD AVDCEAESSD RTAAPGYTDV GNSPLQTPMS TKVGKANKTS RLTKCSKSGP 120 RTPASNVGSP SGANVTPAGP CRFDSSLGLL TKKFINLIKH AEDGILDLNK AADTLEVQKR 180 RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRTGDVDENY PSLQAQLENL SIEERRLDQQ 240 IRWLFVTEED IKGLPCLQNE TLIAIKAPHG TTLEVPDPDE AVDYPQRRYR MVLRSTMGPI 300 DVYLVSQFEE KFEEINGVEV PANIPATSGA NENPATTMVS EDRGKDVELQ VPDDHTMSAD 360 PTAAQDFTGG IMKIVPSDVD SDTDYWLLSD ADISITDLWR TEPGVLWNDL GALDHDYPLG 420 NVSTPPRPQT PPSSLIEVPS TTSNPTKT

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MSGSRAPNPP AQPPQPVMQQ PLKRQLPFSS MKPPFSAAAD YHGFLPDPRQ TTDQETYGIT  60
VKTPLKRKSD AVDCEAESSD RTAAPGYTDV GNSPLQTPMS TKVGKANKTS RLTKCSKSGP  120
RTPASNVGSP SGANVTPAGP CRFDSSLGLL TKKFINLIKH AEDGILDLNK AADTLEVQKR  180
RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRTGDVDENY PSLQAQLENL SIEERRLDQQ  240
IRWLFVTEED IKGLPCLQNE TLIAIKAPHG TTLEVPDPDE AVDYPQRRYR MVLRSTMGPI  300
DVYLVSQFEE KFEEINGVEV PANIPATSGA NENPATTMVS EDRGKDVELQ VPDDHTMSAD  360
PTAAQDFTGG IMKIVPSDVD SDTDYWLLSD ADISITDLWR TEPGVLWNDL GALDHDYPLG  420
NVSTPPRPQT PPSSLIEVPS TTSNPTKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-140	E2F/DP family protein