PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007685.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 194aa    MW: 21158.8 Da    PI: 9.4418
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007685.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.00174668123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C+ C++ F++   L  H  +H
  PCP007685.1 46 FECKTCNRQFPSFQALGGHRASH 68
                 89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MKRSIADVRE LDHGLTVANC LMLLSRGINN NDNQYDSFSV SPSRVFECKT CNRQFPSFQA  60
LGGHRASHKK PRLTGPSGDG NSNSSDQSLS QGSSPKPKTH ECNICGLEFA IGQALGGHMR  120
RHRAALSSSN TTSNIHDRYS SSMSLNPQPA QVFQVLKKTN SGRRAMCLDL NLTPLENDLE  180
ILQLGKAAPL VGFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.17e-38C2H2 family protein