PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007617.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 316aa    MW: 34898.4 Da    PI: 8.3902
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007617.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79.6e-21134183255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   y+G+r+++ +g+W+AeIrdp     +  r++lg++gtaeeAa+a+++a+ +++g
  PCP007617.1 134 VYRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTYGTAEEAARAYDEAAVRIRG 183
                  69*******.**********72....35**********************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MQKGYSDADW NTLSNDFKAT SGYIFSIAGG AMSLKSKKQT ILAQFTMESE LIALAMASQE  60
AGWLRNLLSD TPLWEKPIPA VLIHCDITST TAKVQNRYCN GKRRQIRLVT SDEKPKKASG  120
SAAAAEGKRV RKNVYRGIRQ RPWGKWAAEI RDPHKGVRVW LGTYGTAEEA ARAYDEAAVR  180
IRGDKAKLNF AQPPPSSPLP SLAPDTPPPT KRRCIVAEST LVEPTQPSFQ TGSYYYDPLY  240
HGGGGGEMYA KNEVAGGDGR YELKEQIWSL ESFLGLDEVV VEQPSQVVSG SGESDSLDLW  300
MLDDLVAYRQ QGQLLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-31ERF family protein