PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007494.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Trihelix

Protein Properties

Length: 408aa MW: 45217.8 Da PI: 8.993

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007494.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	80.8	1.9e-25	238	323	1	86
trihelix 1 rWtkqevlaLiearremeerlr.rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev+aLi+ r ++++r +g k+ Wee+s km+e g+ rs +C+ekwen+nk+++++ +++kr + + + cpyf++le PCP007494.1 238 RWPEAEVQALITQRAAFKHKFRvAGTPKGRIWEEISVKMHEMGYVRSGRKCREKWENINKYFRRCMGSDNKR-PANAKLCPYFHELE 323 8*******************558999**************************************98.88889*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MEGEKMTSST STGAAGTVTG TGMSAGHGRH SDEYHHDHQR EQLHVHGHGA AADNINGMHG 60 GMAHSTTMMM MGHQQQHQEP VNRKRKTSPR SGNGLEIERV ELFLGSLVKK VMEQKEQMHK 120 QLIEMVEKKE EERLAREEAW KQQELDRLKR DKEIRAQETS SNLALISFIQ NYLGYEIQVP 180 QPSAATAPER APAPTAAPIP ISVVPKYDHQ RVEGNGKADN GMQRDLMLVS HSDATDRRWP 240 EAEVQALITQ RAAFKHKFRV AGTPKGRIWE EISVKMHEMG YVRSGRKCRE KWENINKYFR 300 RCMGSDNKRP ANAKLCPYFH ELELLHKSAL YYGTSMAAAA AAFHHQHGHG FFGYMNPSDA 360 WVSNNNVNAA SAAAASGLST QLQGGGSAAM LNGDHHQLPH ANGANGGA

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MEGEKMTSST STGAAGTVTG TGMSAGHGRH SDEYHHDHQR EQLHVHGHGA AADNINGMHG  60
GMAHSTTMMM MGHQQQHQEP VNRKRKTSPR SGNGLEIERV ELFLGSLVKK VMEQKEQMHK  120
QLIEMVEKKE EERLAREEAW KQQELDRLKR DKEIRAQETS SNLALISFIQ NYLGYEIQVP  180
QPSAATAPER APAPTAAPIP ISVVPKYDHQ RVEGNGKADN GMQRDLMLVS HSDATDRRWP  240
EAEVQALITQ RAAFKHKFRV AGTPKGRIWE EISVKMHEMG YVRSGRKCRE KWENINKYFR  300
RCMGSDNKRP ANAKLCPYFH ELELLHKSAL YYGTSMAAAA AAFHHQHGHG FFGYMNPSDA  360
WVSNNNVNAA SAAAASGLST QLQGGGSAAM LNGDHHQLPH ANGANGGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47660.1	5e-37	Trihelix family protein