PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007445.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 475aa MW: 52248.2 Da PI: 6.8144

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007445.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	114	6.3e-36	103	163	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k l+cprC+s +tkfCy+nnys+ qPr+fCk+C+ryWt+GG++rnvP+G+ rrknk+ss PCP007445.1 103 PDKVLPCPRCNSLETKFCYFNNYSVYQPRHFCKSCQRYWTAGGTIRNVPLGTRRRKNKHSS 163 78999*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MSEVGDPAIK LFGRIIPFPQ LQIQDLSADK ECLVADTGEC REMEDHSVEK SCKQDTSSEL 60 DNSRENNRQG LVQENEGEVN CDQGEDQCVD SDTSGIEKSF RKPDKVLPCP RCNSLETKFC 120 YFNNYSVYQP RHFCKSCQRY WTAGGTIRNV PLGTRRRKNK HSSLQYHQVV GQPNAVPVTQ 180 GGTLNIVGQQ HLSPCGLPAS PNPANGIKEG LSSVSDALLV ESTETASNQK HQMRNSETGS 240 AADGDDGSLS ATASQHIACL TKEMKQDGLP GYDNDSNHMH TMQYFPAPQW DKTPSWGIMM 300 FGSESSNPNP SHIGHLPMVT VPGFCTPTFA FPFVPSLHWG YMPSWDSRKW NSQMVGSAGS 360 LSLSSFSGNS GCSGNSSPTL GKYARDANVH EDVITKQCLW VPKTLRIDDP KEAAKSSIWS 420 TLRIKQDKNE LVVRGGIFKA FRKKSDNKSQ TLDADRVLQA NPAALSRSQS FQETA

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MSEVGDPAIK LFGRIIPFPQ LQIQDLSADK ECLVADTGEC REMEDHSVEK SCKQDTSSEL  60
DNSRENNRQG LVQENEGEVN CDQGEDQCVD SDTSGIEKSF RKPDKVLPCP RCNSLETKFC  120
YFNNYSVYQP RHFCKSCQRY WTAGGTIRNV PLGTRRRKNK HSSLQYHQVV GQPNAVPVTQ  180
GGTLNIVGQQ HLSPCGLPAS PNPANGIKEG LSSVSDALLV ESTETASNQK HQMRNSETGS  240
AADGDDGSLS ATASQHIACL TKEMKQDGLP GYDNDSNHMH TMQYFPAPQW DKTPSWGIMM  300
FGSESSNPNP SHIGHLPMVT VPGFCTPTFA FPFVPSLHWG YMPSWDSRKW NSQMVGSAGS  360
LSLSSFSGNS GCSGNSSPTL GKYARDANVH EDVITKQCLW VPKTLRIDDP KEAAKSSIWS  420
TLRIKQDKNE LVVRGGIFKA FRKKSDNKSQ TLDADRVLQA NPAALSRSQS FQETA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-39	Dof family protein