PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007392.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 405aa MW: 43307.5 Da PI: 7.2688

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007392.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.7	2.6e-38	31	91	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s PCP007392.1 31 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRS 91 57889****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MPSDSGDQQK KSSQNRKTVK DAQATGAPPP EQEHLPCPRC DSTNTKFCYY NNYNFSQPRH 60 FCKSCRRYWT HGGTLRDIPV GGGTRKNAKR SRTATSAATT TSTSDNNPIS ATPVFLNPGG 120 GAALQFGDLK GNMGNGCGGD GSFNSLLNTH GPGGFLALGG FGLGLSGGFE EMGFGLGRAF 180 WPFPAMGGDC GFGGPHGRMM NTWQIENGEG GGFVNVGVSP VGAELCSWPE LAISTPGLKE 240 KKNNTQFIYY FAVAFMLLVT DFQSYAGAQG DGVNYSRQAD NLPTPEVIEL SCPPSPPPQS 300 PATFFPAPSS LILRRPISAS KPLAMAEHTS SNPAAPSHKH SNGLAAEHSP YLLQHAHNPV 360 WYPWGEEAFA EARERDVPIF LSSNFTLPLF CFLLASVGIW QSADM

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MPSDSGDQQK KSSQNRKTVK DAQATGAPPP EQEHLPCPRC DSTNTKFCYY NNYNFSQPRH  60
FCKSCRRYWT HGGTLRDIPV GGGTRKNAKR SRTATSAATT TSTSDNNPIS ATPVFLNPGG  120
GAALQFGDLK GNMGNGCGGD GSFNSLLNTH GPGGFLALGG FGLGLSGGFE EMGFGLGRAF  180
WPFPAMGGDC GFGGPHGRMM NTWQIENGEG GGFVNVGVSP VGAELCSWPE LAISTPGLKE  240
KKNNTQFIYY FAVAFMLLVT DFQSYAGAQG DGVNYSRQAD NLPTPEVIEL SCPPSPPPQS  300
PATFFPAPSS LILRRPISAS KPLAMAEHTS SNPAAPSHKH SNGLAAEHSP YLLQHAHNPV  360
WYPWGEEAFA EARERDVPIF LSSNFTLPLF CFLLASVGIW QSADM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	2e-39	Dof family protein