PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP007323.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 248aa MW: 28467.8 Da PI: 5.6953 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 63.4 | 7e-20 | 7 | 64 | 1 | 50 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.........k 50 +ppGfrFhPtdeelv++yL+kkv++++++l +vik+vd+yk+ePwdL++ + PCP007323.1 7 VPPGFRFHPTDEELVDYYLRKKVTSRRIDL-DVIKDVDLYKIEPWDLQEhtlngqcsyS 64 69****************************.9***************943344433330 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
METFSHVPPG FRFHPTDEEL VDYYLRKKVT SRRIDLDVIK DVDLYKIEPW DLQEHTLNGQ 60 CSYSILVQLK QEEGWVVCRV FKKKIASMRI KMSENESPCW YDDQVSFMPE LDSPGHNSSS 120 MNMNMVPYHH LPNYPCKKEL DHLPFQVPHE HFFQLPLLGS PKLVQSSSAT AVSSSNSMAP 180 HAYSIDINHT CTFQSSDQDQ NFQGVVYGNS SNDDHQRAVD QLTDWRALDK FVASQLSQDD 240 ASKGNSYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 2e-28 | NAC family protein |