PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007320.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 375aa    MW: 41867.5 Da    PI: 7.7263
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007320.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer98.93.8e-31139196260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  ++vrYkeClkNhAa++Gg+a+DGCgEfmps geegt++al+C+AC CHRnFHR+eve e
  PCP007320.1 139 NGVRYKECLKNHAAAMGGTATDGCGEFMPS-GEEGTIEALNCSACHCHRNFHRKEVEGE 196
                  579**************************9.999*********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MDQLSSQGEI PLTIPVPIPI PINTSFRSGG HGHLIHHHQQ HPHDPTAAAT ARAAVPHNNN  60
KNNHSNFLPP STVVPQNQTP HNTNGSNPMP TGLDHSHEEE EEEEQEEEHH DHFNNANANV  120
VPYKYNTYNN KKQAVVGHNG VRYKECLKNH AAAMGGTATD GCGEFMPSGE EGTIEALNCS  180
ACHCHRNFHR KEVEGEQQQL SSWDHNFHHT INRAAGVGSR KFLLSHERGG GRHKSLLAPP  240
QYPHQHQMIM SNYNMGMGMI GMVGSIPSDQ SDEQEDHHHH RHHGGGSGGT VGSRPAVGHV  300
AKKRFRTKFT QEQKEKMLNF AEKVGWKIQK QEETFVQNFC QEIGVKRRVL KVWMHNNKHN  360
LANKINPPPP PPPAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.11e-64ZF-HD family protein