PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007314.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 465aa MW: 52976.5 Da PI: 6.7633

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007314.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.4	6.1e-49	29	154	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ + PCP007314.1 29 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENFRS 125 79*************************.89***********888889***************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfy+g+apkg +++W+m+eyrl PCP007314.1 126 IGLKKTLVFYSGKAPKGLRSSWIMNEYRL 154 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MSHDDSNKAD DHDHEHDEHV DEHEHDMVMP GFRFHPTEEE LVEFYLRRKV EGKRFNVELI 60 TFLDLYRYDP WELPAMAAIG EKEWFFYVPR DRKYRNGDRP NRVTTSGYWK ATGADRMIRS 120 ENFRSIGLKK TLVFYSGKAP KGLRSSWIMN EYRLPHHETE RYQKGEISLC RVHKRAGVED 180 HPSLPRCLPA SRASTSGSSV LVDQSTTMSD NKKQHTNNTN TIDTVMEKIQ AFNEGQSQQI 240 HHDHEHQMDQ KISIETEGSS GNSDVTTVLG LSKYKVYHHG HHQPHNIESS TSTAAALGQL 300 GTPTHPVDQE EGMPAFLHQL TNSRQVAANC YSGISSTGNS CAALFTGGSS SVSSSNMNAI 360 DDLHRLLNYQ PVHVQQQAAP NHYQQQQYLH HHLVQYYDHH HHPPPQPSNF FSTNLPAAAA 420 ALSTIQPQPQ QQLPPNALPT AFSDRLWDWN PISEPNRPDY NNPFK

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MSHDDSNKAD DHDHEHDEHV DEHEHDMVMP GFRFHPTEEE LVEFYLRRKV EGKRFNVELI  60
TFLDLYRYDP WELPAMAAIG EKEWFFYVPR DRKYRNGDRP NRVTTSGYWK ATGADRMIRS  120
ENFRSIGLKK TLVFYSGKAP KGLRSSWIMN EYRLPHHETE RYQKGEISLC RVHKRAGVED  180
HPSLPRCLPA SRASTSGSSV LVDQSTTMSD NKKQHTNNTN TIDTVMEKIQ AFNEGQSQQI  240
HHDHEHQMDQ KISIETEGSS GNSDVTTVLG LSKYKVYHHG HHQPHNIESS TSTAAALGQL  300
GTPTHPVDQE EGMPAFLHQL TNSRQVAANC YSGISSTGNS CAALFTGGSS SVSSSNMNAI  360
DDLHRLLNYQ PVHVQQQAAP NHYQQQQYLH HHLVQYYDHH HHPPPQPSNF FSTNLPAAAA  420
ALSTIQPQPQ QQLPPNALPT AFSDRLWDWN PISEPNRPDY NNPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-112	NAC family protein