PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007307.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 345aa MW: 39859.6 Da PI: 6.9497

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007307.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.5	7.3e-55	8	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrF+Ptdeelv++yL+kk++ k++++ +vi++vd+yk+ePwdL+ k+ + +++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++++ PCP007307.1 8 VPPGFRFRPTDEELVDYYLRKKIALKPIDF-DVIRDVDLYKIEPWDLEDlcKIGSgDQNEWYFFSHKDKKYPTGSRTNRATKAGFWKATGRDKAIYRG 104 69**************************.9***********943466553556**********************************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ lvg++ktLvfykgrap+g+k+dW+mheyrle PCP007307.1 105 EKFLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 138 9999**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MNTLSSHVPP GFRFRPTDEE LVDYYLRKKI ALKPIDFDVI RDVDLYKIEP WDLEDLCKIG 60 SGDQNEWYFF SHKDKKYPTG SRTNRATKAG FWKATGRDKA IYRGEKFLVG MRKTLVFYKG 120 RAPNGQKSDW IMHEYRLETN ENGTPQAKFK QDNQVLEEGW VVCRAFKKKL AAVSRMGDYE 180 SPDCYDQVSF LPQLDNPPRT SISLNWKAPK FLISQLPLYG NCVMQSSTLT QEEQFAQYIS 240 QQNLFKSSSS PSVHALDNNN DYLQAVDQVK DWRALDKYVA SQLSHDQQDA SKEVTNYSHA 300 EEIFHVAEHI NMLANDASRR PDNNNNIGQD YASTSTSTFQ IDLWK

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MNTLSSHVPP GFRFRPTDEE LVDYYLRKKI ALKPIDFDVI RDVDLYKIEP WDLEDLCKIG  60
SGDQNEWYFF SHKDKKYPTG SRTNRATKAG FWKATGRDKA IYRGEKFLVG MRKTLVFYKG  120
RAPNGQKSDW IMHEYRLETN ENGTPQAKFK QDNQVLEEGW VVCRAFKKKL AAVSRMGDYE  180
SPDCYDQVSF LPQLDNPPRT SISLNWKAPK FLISQLPLYG NCVMQSSTLT QEEQFAQYIS  240
QQNLFKSSSS PSVHALDNNN DYLQAVDQVK DWRALDKYVA SQLSHDQQDA SKEVTNYSHA  300
EEIFHVAEHI NMLANDASRR PDNNNNIGQD YASTSTSTFQ IDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-109	NAC family protein