PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007143.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 621aa MW: 69882.8 Da PI: 4.4297

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007143.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	61.6	2.5e-19	431	565	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.w.dLpkkvkaeekewyfFskrdkkyatgkrknratksgy..Wkatgkdkevls 94 lp+G++F+P+d+el+v++L++kv+g +l++ +++ e+d+y e w +L +++e+ +yfF+ +kk+++ +r +r+ + g Wk++ +dk+v++ PCP007143.1 431 LPVGCHFEPSDKELLVHFLNNKVHGLPLSC-NAVIECDLYGNEEtWrQLF--DQTGERCLYFFTVLKKKTEKASRVERTSSGGCvmWKSQ-NDKPVKA 524 799*************************.7788999998754141342..34567788***************88877556977.6799999 PP NAM 95 k......kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 k +++ +g +++ + +g+ + k dWvm +rl PCP007143.1 525 KldpresTETRIGFNRMFSYVpkEGS-TSKAKGDWVMYTFRL 565 98888776677*******974444.4457******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MASSASGEAL KPSVSNKLKQ KEGTLDSDVG NSPSVVGSED DVDLLKSSTS GATNSNVVKT 60 SNCFSSNDDD MSMDDEDDND NDDDNDYDFD DNDGFLYDVG DDLQSQFDNV DLPPGVEATL 120 PWLNDPSPSE KPSTKTLAIS DLPPCSSTVH CEASSTVPSE ASSTKEPADS NDDSIMQTSQ 180 QFKQFDMVED FSDHHFSRVG YSDGQPPKAW AKQIQDEWKI LEDLPDTIFV RVYEARMELL 240 RAVIIGPPGT PYHDGLFVFD CLFPTDYPKS PPMVYYYSGG LRLNPNLYEC GKVCLSLLGT 300 WSGKQNENWV PGQSTMLQVL VSIQALILNA EPFFNEPGHE RTYVGAEGRR HSQKYNEDTF 360 ILSLKTMMYT LRRPPKVRHL TNYFPFILPR LVFIQPEPTT CTSALFFRAS RRLNLQHTSF 420 IIMETASSLG LPVGCHFEPS DKELLVHFLN NKVHGLPLSC NAVIECDLYG NEETWRQLFD 480 QTGERCLYFF TVLKKKTEKA SRVERTSSGG CVMWKSQNDK PVKAKLDPRE STETRIGFNR 540 MFSYVPKEGS TSKAKGDWVM YTFRLDDSFL NKNNKPRLIR GNVNQEMQSS IVSEPYHEEQ 600 NDDDDDEVDV GSEILKLLDQ D

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MASSASGEAL KPSVSNKLKQ KEGTLDSDVG NSPSVVGSED DVDLLKSSTS GATNSNVVKT  60
SNCFSSNDDD MSMDDEDDND NDDDNDYDFD DNDGFLYDVG DDLQSQFDNV DLPPGVEATL  120
PWLNDPSPSE KPSTKTLAIS DLPPCSSTVH CEASSTVPSE ASSTKEPADS NDDSIMQTSQ  180
QFKQFDMVED FSDHHFSRVG YSDGQPPKAW AKQIQDEWKI LEDLPDTIFV RVYEARMELL  240
RAVIIGPPGT PYHDGLFVFD CLFPTDYPKS PPMVYYYSGG LRLNPNLYEC GKVCLSLLGT  300
WSGKQNENWV PGQSTMLQVL VSIQALILNA EPFFNEPGHE RTYVGAEGRR HSQKYNEDTF  360
ILSLKTMMYT LRRPPKVRHL TNYFPFILPR LVFIQPEPTT CTSALFFRAS RRLNLQHTSF  420
IIMETASSLG LPVGCHFEPS DKELLVHFLN NKVHGLPLSC NAVIECDLYG NEETWRQLFD  480
QTGERCLYFF TVLKKKTEKA SRVERTSSGG CVMWKSQNDK PVKAKLDPRE STETRIGFNR  540
MFSYVPKEGS TSKAKGDWVM YTFRLDDSFL NKNNKPRLIR GNVNQEMQSS IVSEPYHEEQ  600
NDDDDDEVDV GSEILKLLDQ D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	3e-12	NAC family protein