PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007118.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GeBP
Protein Properties Length: 287aa    MW: 31777 Da    PI: 5.127
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007118.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57370.14.4e-2283155270
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlve....KirrLKkKfkkkvk 70 
                  + qr wse+Dei++L+G+i+f++k+g+ +s+++  f ef+k+ ++++ s +qlve    KirrLKkK++  ++
  PCP007118.1  83 KGQRFWSEDDEIAILKGIIEFESKKGVAASSNVAPFLEFIKNDLQVDLSIDQLVEkltdKIRRLKKKYQAGED 155
                  569************************************************9875222279*******97665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MAPKKLAEDP PPAVVEDSDD ETIDEEEEEE DDAVEVSKAK SKTASAKPAA APSSGSKRPA  60
ETEPKPKNSK KKKVGGDDED AKKGQRFWSE DDEIAILKGI IEFESKKGVA ASSNVAPFLE  120
FIKNDLQVDL SIDQLVEKLT DKIRRLKKKY QAGEDGEDPG GKRKPLRKNN KVNNDTVLAL  180
PVSDVSVKKE VQNNVTNRGV KADPDDFWSK YPCLSGSLRT GNCAPRSDLT RLLIEKMPSL  240
VGSSKAKELE ERWRALQLIE MDLSVKKLDL MQEQTKLVLD SMKSLKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.17e-13GeBP family protein