PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006884.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

SBP

Protein Properties

Length: 2181aa MW: 243511 Da PI: 6.7497

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006884.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.9	1.9e-40	148	225	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska++++v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ PCP006884.1 148 VCQVEDCKADLSNAKDYHRRHKVCDMHSKATKAVVGNVLQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 225 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 2181 aa Download sequence
MEAFGGRARN FYVPMVPDLK GAGKKSLEWD LNDWKWDGDL FTASPLNAVQ SDCRSRQLFP 60 LGLPETPSTA GLSNSSSSGS DGICPGNEKG KRELEKRRRA SFVENEGLND EVGSLNLKLG 120 GQAYPIMEGE VQNGKKTKIV GTTLNRAVCQ VEDCKADLSN AKDYHRRHKV CDMHSKATKA 180 VVGNVLQRFC QQCSRFHVLQ EFDEGKRSCR RRLAGHNRRR RKTHPDTVVN GGSLNDERGS 240 SYLLISLLRI LSNMHSNSSD QTKDQDLLSH LLKNLANLSG TVDGRNMSAL LTASQGLLNG 300 GASIQTAQKV PDTVSNGCEP SKPSVSASKM DDYVNREDPS RPIQQCSTVP ASDFRRISSV 360 DADHGGLQVV SGLNATKPFP SRASVPSTSV APETTTGRMQ LTGIDLNNTY DDSQDHLDNL 420 GNSHAPVNSG TVAHGFPLWM RQDSQKSSPP QTSGTSCSTS SSSSGDAQSR TDRIVFKLFG 480 KDPNDLPFVL RAQILDWLSH SPTDIESYIR PGCIILTVYL RLEKSTWEEL CCNLGSIMKQ 540 LLHAANDPFW TTGWVYTRVQ HSVAFTYNGQ VVLDTPLPLK SHKNCRISCI KPIAVSLSER 600 AEFVVKGFNL SRATTRLLCA LEGKYLVQET CYDLMDGADT TVANDQLQCL RFSCSIPNVT 660 GRGLIEVEDH GLSGCFFPFI VAEQEVCSEI CTLEGAIEVA ETADNIQTEP EKLEAKNQAL 720 DFVHELGWLL HRCHTKFRLG HRDPNLELFS FRRFRLLMEF SMDRDWCAVV KKLLGILLEG 780 TVDAGEHPSI ELALLDMSLL HGAVRRKCRP MVELLLRFVL DKGLDKTGSE HRQQVDGDGS 840 NFLFKPDAVG PMGLTPLHVA ASTDGCENIL DALTDDPGKV GIEAWKNARD STGLTPNDYA 900 CLRGCYTYVQ IVQRKINKKH ESGHVVLDIP GVILDSSSKQ KQLDGHKSSK VSRLETERID 960 MKAMQAHCKL CEMKLAYGNT RSLVYRPAML SMVTIAAVCV CVALLFKSSP EVVYVFQPFS 1020 SPNGTCIIYV KGQYVECICN FTFLDRTFSA TYQSHTDRIV FKLFGKDPNE LPLALRSQIL 1080 DWLSHSPTNI ESYIRPGCII LTIYLRLEKS TWEEFCCHLG SSLKTLLDAA DDPFWRTGWV 1140 YTRVQDFVAF TYNEGKYLAQ ETCYDLLDDA DSTVEDDEQQ CLKFSCSIPN VTGRGFIEVE 1200 DHGLSSSFFP FIVAEQEVCS EICMLEDVIE VSETDDDIQS GPEKVEAKNQ ALDFIHELGW 1260 LLHRSRVKFR LGQLDPNLDT FPSGRFRLLM EFSIDHDWCA VVKKLLGILF DGTVDAGEHP 1320 SLESALLDMG LLHRAVRINS RRMVEFLLRF VPGLTGSEQK EQVDRDGNSF LFKPDVVGPM 1380 GLTPLHIAAN TDGCEQVLDA LTDDPGKVGI KAWKNARDSR GLTPYDYACL RSRYSYVHIV 1440 QRKISNTLER GHVVLDIPGL TLDRNGKQKQ SDAHKSSRVA SLETEKNEIK AILRHCRLCE 1500 QKPAYSTTRS LVYRPAMLSM VAVAAVCVCV ALLFKSNPEV VFVLEPFRPK PSMASSISLS 1560 FSSSLLPHPL PLNKNSTATA TAAAAASQKP QYPNFKLLLR AFATPAVSRR STPSPSSDTR 1620 KRHWKKGEYP GVSETSAPAN YRKTPGRSTS SPSSDTRKKH WKRGQFPGVS ETSTPATYRK 1680 TSARSASYPS SDNRKKHWKQ GEFPGVSETS IPAIYRKPPL KNVKKKLDRK NNAKAWVNTV 1740 TEALSDAIDK KQWLQALEVF DMLREQPFYQ PKEGTYMKLI GMLGRCGQPN RARQLFDTMV 1800 EEGCEPTLEL YTALLAAYCR NNLIDEAFSV LNLMKTLPQC QPDVFTYSTL IKVCVDHLKF 1860 DLVESLYEEM AKRLITPNTV TQNIVLSGYG KAGKYDQMEK VLSGMLEGTS CKPDVWTMNV 1920 ILSVFGNKGQ IDMMERWYEK FRDFGIEPET RTLNILIGAY GKKRLYDKMS TVMEYMRKLQ 1980 FPWTTATYNN VIEAFADVGD AKNMEYTFEQ MRAEGMKADT KTFCCLINGY ANAGLFHKVV 2040 SCVQLAGKFE IPENTTFYNA VIAACAKAED LMEMERVFNR MKEKQCQADS TTYSVMVEAY 2100 SKEGMNDKIY YLKQEIGADG NQSDQISVED NQSDQISAED NQSDQISAEY NQSDQISDEG 2160 NQSDQSSFED NQSDQSSFED N

Sequence ? help Back to Top

Protein Sequence Length: 2181 aa Download sequence

MEAFGGRARN FYVPMVPDLK GAGKKSLEWD LNDWKWDGDL FTASPLNAVQ SDCRSRQLFP  60
LGLPETPSTA GLSNSSSSGS DGICPGNEKG KRELEKRRRA SFVENEGLND EVGSLNLKLG  120
GQAYPIMEGE VQNGKKTKIV GTTLNRAVCQ VEDCKADLSN AKDYHRRHKV CDMHSKATKA  180
VVGNVLQRFC QQCSRFHVLQ EFDEGKRSCR RRLAGHNRRR RKTHPDTVVN GGSLNDERGS  240
SYLLISLLRI LSNMHSNSSD QTKDQDLLSH LLKNLANLSG TVDGRNMSAL LTASQGLLNG  300
GASIQTAQKV PDTVSNGCEP SKPSVSASKM DDYVNREDPS RPIQQCSTVP ASDFRRISSV  360
DADHGGLQVV SGLNATKPFP SRASVPSTSV APETTTGRMQ LTGIDLNNTY DDSQDHLDNL  420
GNSHAPVNSG TVAHGFPLWM RQDSQKSSPP QTSGTSCSTS SSSSGDAQSR TDRIVFKLFG  480
KDPNDLPFVL RAQILDWLSH SPTDIESYIR PGCIILTVYL RLEKSTWEEL CCNLGSIMKQ  540
LLHAANDPFW TTGWVYTRVQ HSVAFTYNGQ VVLDTPLPLK SHKNCRISCI KPIAVSLSER  600
AEFVVKGFNL SRATTRLLCA LEGKYLVQET CYDLMDGADT TVANDQLQCL RFSCSIPNVT  660
GRGLIEVEDH GLSGCFFPFI VAEQEVCSEI CTLEGAIEVA ETADNIQTEP EKLEAKNQAL  720
DFVHELGWLL HRCHTKFRLG HRDPNLELFS FRRFRLLMEF SMDRDWCAVV KKLLGILLEG  780
TVDAGEHPSI ELALLDMSLL HGAVRRKCRP MVELLLRFVL DKGLDKTGSE HRQQVDGDGS  840
NFLFKPDAVG PMGLTPLHVA ASTDGCENIL DALTDDPGKV GIEAWKNARD STGLTPNDYA  900
CLRGCYTYVQ IVQRKINKKH ESGHVVLDIP GVILDSSSKQ KQLDGHKSSK VSRLETERID  960
MKAMQAHCKL CEMKLAYGNT RSLVYRPAML SMVTIAAVCV CVALLFKSSP EVVYVFQPFS  1020
SPNGTCIIYV KGQYVECICN FTFLDRTFSA TYQSHTDRIV FKLFGKDPNE LPLALRSQIL  1080
DWLSHSPTNI ESYIRPGCII LTIYLRLEKS TWEEFCCHLG SSLKTLLDAA DDPFWRTGWV  1140
YTRVQDFVAF TYNEGKYLAQ ETCYDLLDDA DSTVEDDEQQ CLKFSCSIPN VTGRGFIEVE  1200
DHGLSSSFFP FIVAEQEVCS EICMLEDVIE VSETDDDIQS GPEKVEAKNQ ALDFIHELGW  1260
LLHRSRVKFR LGQLDPNLDT FPSGRFRLLM EFSIDHDWCA VVKKLLGILF DGTVDAGEHP  1320
SLESALLDMG LLHRAVRINS RRMVEFLLRF VPGLTGSEQK EQVDRDGNSF LFKPDVVGPM  1380
GLTPLHIAAN TDGCEQVLDA LTDDPGKVGI KAWKNARDSR GLTPYDYACL RSRYSYVHIV  1440
QRKISNTLER GHVVLDIPGL TLDRNGKQKQ SDAHKSSRVA SLETEKNEIK AILRHCRLCE  1500
QKPAYSTTRS LVYRPAMLSM VAVAAVCVCV ALLFKSNPEV VFVLEPFRPK PSMASSISLS  1560
FSSSLLPHPL PLNKNSTATA TAAAAASQKP QYPNFKLLLR AFATPAVSRR STPSPSSDTR  1620
KRHWKKGEYP GVSETSAPAN YRKTPGRSTS SPSSDTRKKH WKRGQFPGVS ETSTPATYRK  1680
TSARSASYPS SDNRKKHWKQ GEFPGVSETS IPAIYRKPPL KNVKKKLDRK NNAKAWVNTV  1740
TEALSDAIDK KQWLQALEVF DMLREQPFYQ PKEGTYMKLI GMLGRCGQPN RARQLFDTMV  1800
EEGCEPTLEL YTALLAAYCR NNLIDEAFSV LNLMKTLPQC QPDVFTYSTL IKVCVDHLKF  1860
DLVESLYEEM AKRLITPNTV TQNIVLSGYG KAGKYDQMEK VLSGMLEGTS CKPDVWTMNV  1920
ILSVFGNKGQ IDMMERWYEK FRDFGIEPET RTLNILIGAY GKKRLYDKMS TVMEYMRKLQ  1980
FPWTTATYNN VIEAFADVGD AKNMEYTFEQ MRAEGMKADT KTFCCLINGY ANAGLFHKVV  2040
SCVQLAGKFE IPENTTFYNA VIAACAKAED LMEMERVFNR MKEKQCQADS TTYSVMVEAY  2100
SKEGMNDKIY YLKQEIGADG NQSDQISVED NQSDQISAED NQSDQISAEY NQSDQISDEG  2160
NQSDQSSFED NQSDQSSFED N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein