PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006865.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 376aa    MW: 41273.9 Da    PI: 6.9072
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006865.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.95.7e-18260294135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  PCP006865.1 260 CMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 294
                  99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MEAPEYYKNS FCPQFTPEKR HSFDSSNNRT AVGGGGDHFM VEDLLDFSND DDAVITDGGC  60
PAAFDNVIGN STDSSPINVI DSCNSSSLSG SEPNFGPRNL TEGPFSSDLC VPCDDLAELE  120
WLSNFVEESF SSEDLQKLQL ISGMKSRPDQ PAFETRQFQP DPTRTNINPN GNNNPIFNPE  180
VSVPAKARSK RSRAAPCNWT SRLLLLSSTP EQSDVVVSAA EAASPFPPPS STGKKTVKAA  240
PKKKESQEGS GGGPGDGRKC MHCATDKTPQ WRTGPMGPKT LCNACGVRYK SGRLVPEYRP  300
AASPTFVLTK HSNSHRKVLE LRRQKEIVRA QQTFIHQVPP PQHHHHHHHQ NMVFDVSNGG  360
DYLIHQHVGP DFRQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.18e-78GATA family protein