PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006787.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 414aa MW: 46963.9 Da PI: 4.5346

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006787.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.3	5.7e-34	22	113	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k ye+++d++ +++iswse g+sf++ld+ +f+ ++LpkyFkhsnf+SF+RQLn+YgF+k++ ++ w F+++ F +g+k+ll++i PCP006787.1 22 FLRKCYEMVDDKDSDSIISWSEAGDSFAILDMAQFSISMLPKYFKHSNFSSFMRQLNIYGFRKIDPDR---------WVFANEGFIRGQKHLLKNIA 109 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k+ PCP006787.1 110 RRKH 113 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MVKSAEKGGG DGSGPSGSVP PFLRKCYEMV DDKDSDSIIS WSEAGDSFAI LDMAQFSISM 60 LPKYFKHSNF SSFMRQLNIY GFRKIDPDRW VFANEGFIRG QKHLLKNIAR RKHPQGTDQK 120 KILQQKDNPD IPSENISENG LWKEVENLKT DKVALKQELA KLRQHQEISQ NKLLLLRNRL 180 RGMEKNQQQM LSFLVMAMQS PGFLVQLLHP KENSWRIAEP GDIIEQCMDD DRPVASDGAI 240 VRYQPPMIEA PKPIVPPNSG SEKQPEVDAY LGGMEDFVVN PDFMKMLMDE KSSPVETHAP 300 YTLPDISDDG AWEQFLLASP FLENIEGTKE DGEEPADARM EVEPMVPDLD EAQKFDYFVE 360 QMKKSQNFAS ESTVDGSNME GSQNLEFITE QMEHLASDSN NMEQNQESRR TTSV

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MVKSAEKGGG DGSGPSGSVP PFLRKCYEMV DDKDSDSIIS WSEAGDSFAI LDMAQFSISM  60
LPKYFKHSNF SSFMRQLNIY GFRKIDPDRW VFANEGFIRG QKHLLKNIAR RKHPQGTDQK  120
KILQQKDNPD IPSENISENG LWKEVENLKT DKVALKQELA KLRQHQEISQ NKLLLLRNRL  180
RGMEKNQQQM LSFLVMAMQS PGFLVQLLHP KENSWRIAEP GDIIEQCMDD DRPVASDGAI  240
VRYQPPMIEA PKPIVPPNSG SEKQPEVDAY LGGMEDFVVN PDFMKMLMDE KSSPVETHAP  300
YTLPDISDDG AWEQFLLASP FLENIEGTKE DGEEPADARM EVEPMVPDLD EAQKFDYFVE  360
QMKKSQNFAS ESTVDGSNME GSQNLEFITE QMEHLASDSN NMEQNQESRR TTSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	9e-91	HSF family protein