PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP006736.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | ERF | ||||||||
Protein Properties | Length: 251aa MW: 28454.9 Da PI: 6.3126 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1e-17 | 106 | 155 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + + r++lg+f++ae Aa a+++a+ +l+g PCP006736.1 106 YRGVRRRP-WGKYAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFALRG 155 9*******.**********422...25*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MEMESAFFHF SSPEFSSDSS FGSQHSFSWG DESLLLPFNS HELMNFPPFN INDSQDMLLY 60 DVVARGAKQT LVAQNEANSF NGVKEQEVTS ANNQTLEEKF TKEKAYRGVR RRPWGKYAAE 120 IRDSTRHGIR VWLGTFDSAE AAALAYDQAA FALRGSLAVL NFPAQVVQES LQEIKYRHDE 180 ACSPVIALKR RHSMKRKSMH KKGNKPSQCT DQRKVQEVLP QNVMVLEDLG VEYLEELLDI 240 SSCGSNHWSP Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 4e-56 | ERF family protein |