PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006735.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 351aa    MW: 38767.5 Da    PI: 6.2454
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006735.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.93.7e-161970256
          AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
                 +y+GVr ++ +g+++Ae rd       +  r +lg+f taeeAa+a+++a+ +++g+
  PCP006735.1 19 RYRGVRTRP-WGKFAAETRDsT-R---QgGRLWLGTFNTAEEAARAYDRAAFSMRGA 70
                 69****999.*******99922.2...239************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MERGQSKGKA KEEGQRDVRY RGVRTRPWGK FAAETRDSTR QGGRLWLGTF NTAEEAARAY  60
DRAAFSMRGA LAILNFPSEY GLKDAGHSAA TTSSSSSSSS SSFPSSSRIH NASRTEFGRE  120
IFEFECLDDS VLEDLLDFEN NSKSRVYSAK LHNGTQARLG IASFYPKILH FKTKRRFSKS  180
KSESKSDDSV HHTKRRFSKS KSDDSVDEEE EDADEDDDAD EGEEDDDDEE EDDDVSPRQI  240
ALGLARIHRP GARAYSGSLA SQRWTSSLWQ SGTVPQPVPR AVAPAGAALI TVGIQAIASC  300
GRWDYVAWAP LVSDMCAAVF ATHMGEWKWG FGLHSRTSHS HGWFGVGVHL A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-28ERF family protein