PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006691.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 455aa MW: 49639.3 Da PI: 6.0828

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006691.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.3	9.1e-40	114	174	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s PCP006691.1 114 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSA 174 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MLETKDPAIK LFGKKISLPA DIEDLGFARP VEKEVEVELE EECEEEEEDA ETEQNEDDGS 60 QPKSEDPTNL ETLPGSVVNP KTPSIDEESA QTKTAQTEKE QSTENSEEKT LKKPDKILPC 120 PRCNSMDTKF CYYNNYNVNQ PRHFCKACQR YWTAGGTMRN VPVGAGRRKN KNSASHFRHM 180 TISEALEAAR IDAPNGVHHP ALKSNGRVLS FGVDAPICDS MASSLNPADK KVPNGTRNGL 240 HKSEEQVFPS PCKARDNGDD SSSASSVNVS KPHVQNVNGF SSQIPCLPGV PWPYPWNAAV 300 PPPAFCPPGF PLSFCPAPYW NCGVPGAWNV PWFGPQPASP NQKSPRSGSN SPTLGKHSRD 360 EDVLKPEILE KEESSRQKNG CVLVPKTLRI DDPSEAAKSS IWATLGIKND SISGGGLFKA 420 FQSKSDKKKT VSESSPALRA NPAALSRSLN FHESS

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MLETKDPAIK LFGKKISLPA DIEDLGFARP VEKEVEVELE EECEEEEEDA ETEQNEDDGS  60
QPKSEDPTNL ETLPGSVVNP KTPSIDEESA QTKTAQTEKE QSTENSEEKT LKKPDKILPC  120
PRCNSMDTKF CYYNNYNVNQ PRHFCKACQR YWTAGGTMRN VPVGAGRRKN KNSASHFRHM  180
TISEALEAAR IDAPNGVHHP ALKSNGRVLS FGVDAPICDS MASSLNPADK KVPNGTRNGL  240
HKSEEQVFPS PCKARDNGDD SSSASSVNVS KPHVQNVNGF SSQIPCLPGV PWPYPWNAAV  300
PPPAFCPPGF PLSFCPAPYW NCGVPGAWNV PWFGPQPASP NQKSPRSGSN SPTLGKHSRD  360
EDVLKPEILE KEESSRQKNG CVLVPKTLRI DDPSEAAKSS IWATLGIKND SISGGGLFKA  420
FQSKSDKKKT VSESSPALRA NPAALSRSLN FHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-115	Dof family protein