PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005774.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 388aa MW: 43149.9 Da PI: 4.5937

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005774.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151.9	2.9e-47	8	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 l pGfrF+Ptd elv++yLk+kv gk+l+ ++++evdi+k+ PwdLp k + ++++ +wyfF+++++ky+tg r++r+t+ gyWkatg+d++vl + PCP005774.1 8 LSPGFRFSPTDVELVQYYLKRKVMGKRLPY-NFVAEVDIHKYAPWDLPeKsSWQSGDLKWYFFCPTERKYPTGARAKRTTEYGYWKATGNDRSVLY-N 103 579*************************.89**********95345666778**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ge+ g ktL+f++g+apkge+tdWvmheyrle PCP005774.1 104 GEVAGKIKTLIFHTGQAPKGERTDWVMHEYRLE 136 99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MGKGKSSLSP GFRFSPTDVE LVQYYLKRKV MGKRLPYNFV AEVDIHKYAP WDLPEKSSWQ 60 SGDLKWYFFC PTERKYPTGA RAKRTTEYGY WKATGNDRSV LYNGEVAGKI KTLIFHTGQA 120 PKGERTDWVM HEYRLESKDL ANRGVPQESY VLCTIFQKEG PGPKNGAQYG APLMEEDWSD 180 DEAENCSEAV PHANMPEPNL VPPSNYNSST TTSTYSHGSM HIRPSSESCI SDVVQLSCHV 240 PQLVSSNHAT VEEPHTSNDD DILSILACFS EESPSLIKEN EKNEELGNVV PIGNASATPH 300 VVSDDIYVTL VDLGKVARVG EDGCSFSSLP NSVCATGQMP LGDDGQYLEL DDLGEQFNYH 360 DSTHTRPPPM FGEPQTLLEE MPFQDETS

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MGKGKSSLSP GFRFSPTDVE LVQYYLKRKV MGKRLPYNFV AEVDIHKYAP WDLPEKSSWQ  60
SGDLKWYFFC PTERKYPTGA RAKRTTEYGY WKATGNDRSV LYNGEVAGKI KTLIFHTGQA  120
PKGERTDWVM HEYRLESKDL ANRGVPQESY VLCTIFQKEG PGPKNGAQYG APLMEEDWSD  180
DEAENCSEAV PHANMPEPNL VPPSNYNSST TTSTYSHGSM HIRPSSESCI SDVVQLSCHV  240
PQLVSSNHAT VEEPHTSNDD DILSILACFS EESPSLIKEN EKNEELGNVV PIGNASATPH  300
VVSDDIYVTL VDLGKVARVG EDGCSFSSLP NSVCATGQMP LGDDGQYLEL DDLGEQFNYH  360
DSTHTRPPPM FGEPQTLLEE MPFQDETS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	1e-91	NAC family protein