PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP005564.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NF-YB | ||||||||
Protein Properties | Length: 172aa MW: 19213.4 Da PI: 8.2916 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 150.2 | 4e-47 | 1 | 81 | 17 | 97 |
NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 mkk lPanakiskdaketvqecvsefisf+t+easdkcqrekrkting+dllwa++tlGfe+yveplkvyl+k+re+egek PCP005564.1 1 MKKGLPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGEDLLWAMTTLGFEEYVEPLKVYLHKFREVEGEK 81 9*****************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MKKGLPANAK ISKDAKETVQ ECVSEFISFI TGEASDKCQR EKRKTINGED LLWAMTTLGF 60 EEYVEPLKVY LHKFREVEGE KMTGSTNTSA GTGTGMSAGH GRHADRYHRD HEREQRYVHG 120 HGAARDSING MYGVMSTQST TTMMMDHQQH HHHEGHLYGS GGKPSTGHGR PR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 9e-53 | NF-YB family protein |