PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005520.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 551aa MW: 60726.8 Da PI: 4.7133

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005520.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	98.3	7.3e-31	43	166	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT.T.EEE---SSBTTTT.....................X CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY.g.Fkkvkdeekksks.....................k 75 Fl k+y++++d++++ ++sw+ ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+Y g +++v+ + k+ + + PCP005520.1 43 FLCKTYDMVDDPATDPVVSWTPTNNSFVVWKPPEFARDLLPKYFKHNNFSSFVRQLNTYvGlWTMVTLRAKHWGDldsgyetllvpymskmvmqkvD 139 9******************999*******************************64356665555554449999999999999887776544 PP TTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 76 ekiweFkhksFkkgkkellekikrkks 102 ++ weF+h+ F +g+k+ll++i+r+k PCP005520.1 140 PDRWEFAHEGFLRGQKDLLKSINRRKP 166 9*********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MGGADNNNRD ETSVAAGGQQ AASGSSSAPA PAPLLKSNAP PPFLCKTYDM VDDPATDPVV 60 SWTPTNNSFV VWKPPEFARD LLPKYFKHNN FSSFVRQLNT YVGLWTMVTL RAKHWGDLDS 120 GYETLLVPYM SKMVMQKVDP DRWEFAHEGF LRGQKDLLKS INRRKPAHGH SHQQPQPSHG 180 QNSMGACVEV GKFGLEEEVE RLKRDKNVLM QELIRLRQQQ QYTDNQLQTM LQRLQGMEQR 240 QQQMVSFLAK AMHSPGLFTQ FVQQNESSRR ITEVNKKRRL KKEGIAESEH STTPDGQIVK 300 YQPPMNEAAK AMLRQIMNRD ISSRLESSNN NFDNFLIGDG SSLSSSAVNS GSSSSRTSGV 360 TLQEVPLASG HGLPSVISET HSSPRVTNSG TVMRSLFSDV NALVGAQESP SIPIPQTNVI 420 IPELSQIPDM PPEGLVDIPE ESMAGEDTGV GFIENMASEA GDGYIDPSPE VLNGSLAIDF 480 DNISSDIEAF LKDWDDIIQN PGADEMDSTC AEVGLRIENE EQQPTENGDK TPNMDNLTEK 540 MGLLTSDTKG V

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MGGADNNNRD ETSVAAGGQQ AASGSSSAPA PAPLLKSNAP PPFLCKTYDM VDDPATDPVV  60
SWTPTNNSFV VWKPPEFARD LLPKYFKHNN FSSFVRQLNT YVGLWTMVTL RAKHWGDLDS  120
GYETLLVPYM SKMVMQKVDP DRWEFAHEGF LRGQKDLLKS INRRKPAHGH SHQQPQPSHG  180
QNSMGACVEV GKFGLEEEVE RLKRDKNVLM QELIRLRQQQ QYTDNQLQTM LQRLQGMEQR  240
QQQMVSFLAK AMHSPGLFTQ FVQQNESSRR ITEVNKKRRL KKEGIAESEH STTPDGQIVK  300
YQPPMNEAAK AMLRQIMNRD ISSRLESSNN NFDNFLIGDG SSLSSSAVNS GSSSSRTSGV  360
TLQEVPLASG HGLPSVISET HSSPRVTNSG TVMRSLFSDV NALVGAQESP SIPIPQTNVI  420
IPELSQIPDM PPEGLVDIPE ESMAGEDTGV GFIENMASEA GDGYIDPSPE VLNGSLAIDF  480
DNISSDIEAF LKDWDDIIQN PGADEMDSTC AEVGLRIENE EQQPTENGDK TPNMDNLTEK  540
MGLLTSDTKG V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	275	282	NKKRRLKK
2	276	281	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-103	HSF family protein