PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005357.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 322aa    MW: 35790.4 Da    PI: 5.9417
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005357.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.58.7e-19241274134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  Cs+C++ kTp+WR gp g+ktLCnaCG+++++ +
  PCP005357.1 241 CSHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGR 274
                  *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MEYCIEAKAL KSSLRRELAA KSTQHVLLEE LWCATGISGV PCEDFSVDDL LDLSNGEFED  60
GSVEEEEEEE RESVSVDDEI SNSSSLVLPD SDSGLATQLL VPDDDLAELE WVSHFVDDSL  120
PDLSLLHTIG TQKPDALLMN RFEPETKPVH LRSPLFPFQV PVKPRTKRYR PASRVWSSSS  180
SCSPSSSPCS SGFSFSTPCL IFNPVQSMDV FVGEPAAKKQ KKKPAVQTGE GSIVGQFQRR  240
CSHCQVQKTP QWRTGPLGPK TLCNACGVRF KSGRLFPEYR PACSPTFSGA VHSNSHRKVL  300
EMRKRKDVGE PEPRLNRMIR SF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-54GATA family protein