PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005341.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SRS
Protein Properties Length: 304aa    MW: 32504.1 Da    PI: 8.9021
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005341.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702181.53.4e-561202634154
       DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101
                  + ++C+dCGn+akk+C+++RCRtCC+ rg++C+thvkstWvpa++rrerq++ + a       + ++ s +  +     + ++ s   ++a s+    
  PCP005341.1 120 NMKACKDCGNRAKKGCEYRRCRTCCRGRGYHCSTHVKSTWVPASRRRERQNMVTVAVPGVGGGEGSSGSSSVAKR---PRVSVPS---QNA-STDANV 210
                  5679************************************************99998887766644433333222...1111111...112.222334 PP

       DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                  ++slP++v+++avfrc rv+++++ge+elaYq++v+i+Ghvf+G+Lyd+G++e
  PCP005341.1 211 KRSLPDKVRAPAVFRCHRVTAISNGEAELAYQATVKISGHVFRGLLYDHGVDE 263
                  567***********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MLGLRDILLI APTPTSLHHQ HQPISSDHHT ALPLPSSAAL GVGLGIFPLL TATPHAPTAE  60
GNSDTSHYWG LRKYQDPNSS KQDMLNFGNQ NHGGVQQHEQ VVDCHGNNDR DGAGGGKSSN  120
MKACKDCGNR AKKGCEYRRC RTCCRGRGYH CSTHVKSTWV PASRRRERQN MVTVAVPGVG  180
GGEGSSGSSS VAKRPRVSVP SQNASTDANV KRSLPDKVRA PAVFRCHRVT AISNGEAELA  240
YQATVKISGH VFRGLLYDHG VDENNTLPCI SQPNLESDTN QRNADSASTP TVPPSNNACP  300
TSTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.15e-37SRS family protein